Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb7Q8CDY9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb7Q8CDY9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb7Q8CDY9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.13■□□□□ 0.65
Pcdhb7Q8CDY9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb7Q8CDY9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb7Q8CDY9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb7Q8CDY9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb7Q8CDY9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb7Q8CDY9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb7Q8CDY9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb7Q8CDY9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb7Q8CDY9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcdhb7Q8CDY9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb7Q8CDY9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb7Q8CDY9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb7Q8CDY9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb7Q8CDY9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pcdhb7Q8CDY9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb7Q8CDY9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
Pcdhb7Q8CDY9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb7Q8CDY9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb7Q8CDY9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb7Q8CDY9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.12■□□□□ 0.65
Pcdhb7Q8CDY9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Pcdhb7Q8CDY9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb7Q8CDY9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb7Q8CDY9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb7Q8CDY9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdhb7Q8CDY9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb7Q8CDY9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb7Q8CDY9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb7Q8CDY9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb7Q8CDY9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb7Q8CDY9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.11■□□□□ 0.65
Pcdhb7Q8CDY9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.11■□□□□ 0.65
Pcdhb7Q8CDY9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb7Q8CDY9 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.11■□□□□ 0.65
Pcdhb7Q8CDY9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb7Q8CDY9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb7Q8CDY9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb7Q8CDY9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Gm8493-201ENSMUST00000196881 489 ntBASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb7Q8CDY9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb7Q8CDY9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb7Q8CDY9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pcdhb7Q8CDY9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb7Q8CDY9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb7Q8CDY9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb7Q8CDY9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb7Q8CDY9 Gm12251-201ENSMUST00000117893 792 ntBASIC19.09■□□□□ 0.65
Pcdhb7Q8CDY9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb7Q8CDY9 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.09■□□□□ 0.65
Pcdhb7Q8CDY9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb7Q8CDY9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb7Q8CDY9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb7Q8CDY9 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.09■□□□□ 0.65
Pcdhb7Q8CDY9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdhb7Q8CDY9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb7Q8CDY9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb7Q8CDY9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb7Q8CDY9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb7Q8CDY9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb7Q8CDY9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb7Q8CDY9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Pcdhb7Q8CDY9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.08■□□□□ 0.64
Pcdhb7Q8CDY9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.08■□□□□ 0.64
Pcdhb7Q8CDY9 Gm45417-201ENSMUST00000209533 758 ntBASIC19.08■□□□□ 0.64
Pcdhb7Q8CDY9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb7Q8CDY9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb7Q8CDY9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdhb7Q8CDY9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.08■□□□□ 0.64
Pcdhb7Q8CDY9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb7Q8CDY9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhb7Q8CDY9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb7Q8CDY9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb7Q8CDY9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb7Q8CDY9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb7Q8CDY9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhb7Q8CDY9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb7Q8CDY9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms