Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q8CD60 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q8CD60 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q8CD60 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Q8CD60 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q8CD60 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q8CD60 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Q8CD60 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Q8CD60 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q8CD60 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q8CD60 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q8CD60 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Q8CD60 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Q8CD60 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.1■□□□□ 0.81
Q8CD60 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8CD60 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8CD60 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8CD60 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8CD60 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Q8CD60 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.1■□□□□ 0.81
Q8CD60 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8CD60 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8CD60 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8CD60 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Q8CD60 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Q8CD60 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Q8CD60 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Q8CD60 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Q8CD60 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.09■□□□□ 0.81
Q8CD60 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Q8CD60 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.09■□□□□ 0.81
Q8CD60 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.09■□□□□ 0.81
Q8CD60 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Q8CD60 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Q8CD60 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.09■□□□□ 0.81
Q8CD60 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Q8CD60 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q8CD60 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q8CD60 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q8CD60 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Q8CD60 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Q8CD60 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.08■□□□□ 0.81
Q8CD60 Gm9988-201ENSMUST00000069786 435 ntBASIC20.08■□□□□ 0.81
Q8CD60 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Q8CD60 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Q8CD60 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.08■□□□□ 0.8
Q8CD60 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Q8CD60 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Q8CD60 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q8CD60 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q8CD60 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
Q8CD60 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Q8CD60 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.07■□□□□ 0.8
Q8CD60 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q8CD60 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Q8CD60 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.07■□□□□ 0.8
Q8CD60 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Q8CD60 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Q8CD60 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q8CD60 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Q8CD60 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Q8CD60 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Q8CD60 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q8CD60 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Q8CD60 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q8CD60 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Q8CD60 Gm7860-201ENSMUST00000121190 879 ntBASIC20.06■□□□□ 0.8
Q8CD60 Gm38205-201ENSMUST00000192243 258 ntBASIC20.06■□□□□ 0.8
Q8CD60 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q8CD60 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Q8CD60 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q8CD60 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Q8CD60 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Q8CD60 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Q8CD60 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Q8CD60 Reep4-203ENSMUST00000226563 1444 ntBASIC20.05■□□□□ 0.8
Q8CD60 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Q8CD60 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Q8CD60 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.05■□□□□ 0.8
Q8CD60 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Q8CD60 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Q8CD60 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Q8CD60 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Q8CD60 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Q8CD60 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Q8CD60 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.04■□□□□ 0.8
Q8CD60 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Q8CD60 Gm10493-201ENSMUST00000097270 612 ntBASIC20.04■□□□□ 0.8
Q8CD60 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Q8CD60 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q8CD60 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Q8CD60 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q8CD60 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q8CD60 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Q8CD60 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q8CD60 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.03■□□□□ 0.8
Q8CD60 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q8CD60 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Q8CD60 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Q8CD60 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms