Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx6Q8C7R7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx6Q8C7R7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.39■□□□□ 0.69
Rfx6Q8C7R7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx6Q8C7R7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx6Q8C7R7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx6Q8C7R7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx6Q8C7R7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rfx6Q8C7R7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx6Q8C7R7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx6Q8C7R7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rfx6Q8C7R7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx6Q8C7R7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx6Q8C7R7 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.38■□□□□ 0.69
Rfx6Q8C7R7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.38■□□□□ 0.69
Rfx6Q8C7R7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx6Q8C7R7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx6Q8C7R7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx6Q8C7R7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx6Q8C7R7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx6Q8C7R7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx6Q8C7R7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx6Q8C7R7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx6Q8C7R7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx6Q8C7R7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx6Q8C7R7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx6Q8C7R7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx6Q8C7R7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx6Q8C7R7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Rfx6Q8C7R7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx6Q8C7R7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.37■□□□□ 0.69
Rfx6Q8C7R7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.37■□□□□ 0.69
Rfx6Q8C7R7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx6Q8C7R7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx6Q8C7R7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx6Q8C7R7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rfx6Q8C7R7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx6Q8C7R7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 Serp2-204ENSMUST00000228055 705 ntBASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 Golgb1-201ENSMUST00000023534 498 ntBASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rfx6Q8C7R7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.35■□□□□ 0.69
Rfx6Q8C7R7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx6Q8C7R7 BC021767-201ENSMUST00000126387 1716 ntBASIC19.34■□□□□ 0.69
Rfx6Q8C7R7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx6Q8C7R7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx6Q8C7R7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx6Q8C7R7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx6Q8C7R7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx6Q8C7R7 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.34■□□□□ 0.69
Rfx6Q8C7R7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx6Q8C7R7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx6Q8C7R7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfx6Q8C7R7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfx6Q8C7R7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfx6Q8C7R7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfx6Q8C7R7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfx6Q8C7R7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx6Q8C7R7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx6Q8C7R7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx6Q8C7R7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx6Q8C7R7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.33■□□□□ 0.68
Rfx6Q8C7R7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx6Q8C7R7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx6Q8C7R7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx6Q8C7R7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Rfx6Q8C7R7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rfx6Q8C7R7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.32■□□□□ 0.68
Rfx6Q8C7R7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx6Q8C7R7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms