Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim9Q8C7M3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim9Q8C7M3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim9Q8C7M3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim9Q8C7M3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim9Q8C7M3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim9Q8C7M3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim9Q8C7M3 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.14■□□□□ 0.97
Trim9Q8C7M3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim9Q8C7M3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim9Q8C7M3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim9Q8C7M3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Trim9Q8C7M3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim9Q8C7M3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim9Q8C7M3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim9Q8C7M3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim9Q8C7M3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim9Q8C7M3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim9Q8C7M3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim9Q8C7M3 Gm43060-201ENSMUST00000200621 289 ntBASIC21.13■□□□□ 0.97
Trim9Q8C7M3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim9Q8C7M3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim9Q8C7M3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim9Q8C7M3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Trim9Q8C7M3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim9Q8C7M3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim9Q8C7M3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim9Q8C7M3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim9Q8C7M3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim9Q8C7M3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim9Q8C7M3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Trim9Q8C7M3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim9Q8C7M3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim9Q8C7M3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim9Q8C7M3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim9Q8C7M3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim9Q8C7M3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim9Q8C7M3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.11■□□□□ 0.97
Trim9Q8C7M3 Gm7860-201ENSMUST00000121190 879 ntBASIC21.11■□□□□ 0.97
Trim9Q8C7M3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim9Q8C7M3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.11■□□□□ 0.97
Trim9Q8C7M3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim9Q8C7M3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim9Q8C7M3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim9Q8C7M3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Trim9Q8C7M3 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.11■□□□□ 0.97
Trim9Q8C7M3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Trim9Q8C7M3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim9Q8C7M3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim9Q8C7M3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim9Q8C7M3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim9Q8C7M3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim9Q8C7M3 Golph3-205ENSMUST00000228671 2842 ntBASIC21.09■□□□□ 0.97
Trim9Q8C7M3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim9Q8C7M3 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.09■□□□□ 0.97
Trim9Q8C7M3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim9Q8C7M3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim9Q8C7M3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim9Q8C7M3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim9Q8C7M3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim9Q8C7M3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim9Q8C7M3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim9Q8C7M3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.08■□□□□ 0.97
Trim9Q8C7M3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Trim9Q8C7M3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim9Q8C7M3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim9Q8C7M3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim9Q8C7M3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.07■□□□□ 0.96
Trim9Q8C7M3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms