Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cfap54Q8C6S9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cfap54Q8C6S9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap54Q8C6S9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap54Q8C6S9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap54Q8C6S9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.56■□□□□ 0.56
Cfap54Q8C6S9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cfap54Q8C6S9 Gm11249-201ENSMUST00000117071 859 ntBASIC18.56■□□□□ 0.56
Cfap54Q8C6S9 Gm6433-201ENSMUST00000118634 875 ntBASIC18.56■□□□□ 0.56
Cfap54Q8C6S9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.56■□□□□ 0.56
Cfap54Q8C6S9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.56■□□□□ 0.56
Cfap54Q8C6S9 Gm10819-201ENSMUST00000099988 561 ntBASIC18.56■□□□□ 0.56
Cfap54Q8C6S9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cfap54Q8C6S9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cfap54Q8C6S9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.55■□□□□ 0.56
Cfap54Q8C6S9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.55■□□□□ 0.56
Cfap54Q8C6S9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap54Q8C6S9 Gm37055-201ENSMUST00000191866 133 ntBASIC18.55■□□□□ 0.56
Cfap54Q8C6S9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cfap54Q8C6S9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cfap54Q8C6S9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Cfap54Q8C6S9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap54Q8C6S9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap54Q8C6S9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap54Q8C6S9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cfap54Q8C6S9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap54Q8C6S9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap54Q8C6S9 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.54■□□□□ 0.56
Cfap54Q8C6S9 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.54■□□□□ 0.56
Cfap54Q8C6S9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.54■□□□□ 0.56
Cfap54Q8C6S9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap54Q8C6S9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap54Q8C6S9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cfap54Q8C6S9 Gm11643-201ENSMUST00000119578 864 ntBASIC18.53■□□□□ 0.56
Cfap54Q8C6S9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap54Q8C6S9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.53■□□□□ 0.56
Cfap54Q8C6S9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap54Q8C6S9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap54Q8C6S9 Dio3-201ENSMUST00000097228 1449 ntBASIC18.53■□□□□ 0.56
Cfap54Q8C6S9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cfap54Q8C6S9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap54Q8C6S9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap54Q8C6S9 Gm10698-201ENSMUST00000182663 604 ntBASIC18.52■□□□□ 0.56
Cfap54Q8C6S9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap54Q8C6S9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cfap54Q8C6S9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap54Q8C6S9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap54Q8C6S9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cfap54Q8C6S9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.52■□□□□ 0.56
Cfap54Q8C6S9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap54Q8C6S9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap54Q8C6S9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cfap54Q8C6S9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cfap54Q8C6S9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cfap54Q8C6S9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cfap54Q8C6S9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.52■□□□□ 0.55
Cfap54Q8C6S9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap54Q8C6S9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cfap54Q8C6S9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.51■□□□□ 0.55
Cfap54Q8C6S9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap54Q8C6S9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.51■□□□□ 0.55
Cfap54Q8C6S9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap54Q8C6S9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap54Q8C6S9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap54Q8C6S9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap54Q8C6S9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap54Q8C6S9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap54Q8C6S9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cfap54Q8C6S9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cfap54Q8C6S9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap54Q8C6S9 Gm2559-201ENSMUST00000201323 363 ntBASIC18.49■□□□□ 0.55
Cfap54Q8C6S9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap54Q8C6S9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap54Q8C6S9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap54Q8C6S9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap54Q8C6S9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap54Q8C6S9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap54Q8C6S9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap54Q8C6S9 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.49■□□□□ 0.55
Cfap54Q8C6S9 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.49■□□□□ 0.55
Cfap54Q8C6S9 Mir1199-201ENSMUST00000117015 119 ntBASIC18.49■□□□□ 0.55
Cfap54Q8C6S9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap54Q8C6S9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap54Q8C6S9 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms