Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Nek11Q8C0Q4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nek11Q8C0Q4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nek11Q8C0Q4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.74■■□□□ 1.23
Nek11Q8C0Q4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nek11Q8C0Q4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nek11Q8C0Q4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Nek11Q8C0Q4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Nek11Q8C0Q4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nek11Q8C0Q4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nek11Q8C0Q4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nek11Q8C0Q4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.74■■□□□ 1.23
Nek11Q8C0Q4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nek11Q8C0Q4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Nek11Q8C0Q4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Nek11Q8C0Q4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Nek11Q8C0Q4 Gm9988-201ENSMUST00000069786 435 ntBASIC22.73■■□□□ 1.23
Nek11Q8C0Q4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Nek11Q8C0Q4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Nek11Q8C0Q4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Nek11Q8C0Q4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Nek11Q8C0Q4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.73■■□□□ 1.23
Nek11Q8C0Q4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Nek11Q8C0Q4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Nek11Q8C0Q4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Nek11Q8C0Q4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Nek11Q8C0Q4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Nek11Q8C0Q4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Nek11Q8C0Q4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Nek11Q8C0Q4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Nek11Q8C0Q4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.72■■□□□ 1.23
Nek11Q8C0Q4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Nek11Q8C0Q4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.72■■□□□ 1.23
Nek11Q8C0Q4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Nek11Q8C0Q4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Nek11Q8C0Q4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Nek11Q8C0Q4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Nek11Q8C0Q4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Nek11Q8C0Q4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Nek11Q8C0Q4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Nek11Q8C0Q4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Nek11Q8C0Q4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Nek11Q8C0Q4 Reep4-203ENSMUST00000226563 1444 ntBASIC22.71■■□□□ 1.23
Nek11Q8C0Q4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.71■■□□□ 1.23
Nek11Q8C0Q4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Nek11Q8C0Q4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Nek11Q8C0Q4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
Nek11Q8C0Q4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.7■■□□□ 1.22
Nek11Q8C0Q4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.7■■□□□ 1.22
Nek11Q8C0Q4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Nek11Q8C0Q4 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.7■■□□□ 1.22
Nek11Q8C0Q4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Nek11Q8C0Q4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Nek11Q8C0Q4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Nek11Q8C0Q4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nek11Q8C0Q4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nek11Q8C0Q4 Gm15039-201ENSMUST00000118914 875 ntBASIC22.69■■□□□ 1.22
Nek11Q8C0Q4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nek11Q8C0Q4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Nek11Q8C0Q4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.69■■□□□ 1.22
Nek11Q8C0Q4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nek11Q8C0Q4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Nek11Q8C0Q4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nek11Q8C0Q4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Nek11Q8C0Q4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nek11Q8C0Q4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Nek11Q8C0Q4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nek11Q8C0Q4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nek11Q8C0Q4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nek11Q8C0Q4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nek11Q8C0Q4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Nek11Q8C0Q4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC22.67■■□□□ 1.22
Nek11Q8C0Q4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Nek11Q8C0Q4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Nek11Q8C0Q4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Nek11Q8C0Q4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Nek11Q8C0Q4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Nek11Q8C0Q4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nek11Q8C0Q4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Nek11Q8C0Q4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Nek11Q8C0Q4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.66■■□□□ 1.22
Nek11Q8C0Q4 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.66■■□□□ 1.22
Nek11Q8C0Q4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Nek11Q8C0Q4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.66■■□□□ 1.22
Nek11Q8C0Q4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms