Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trub1Q8C0D0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trub1Q8C0D0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trub1Q8C0D0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.75■□□□□ 0.75
Trub1Q8C0D0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.75■□□□□ 0.75
Trub1Q8C0D0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trub1Q8C0D0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trub1Q8C0D0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trub1Q8C0D0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.75■□□□□ 0.75
Trub1Q8C0D0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trub1Q8C0D0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trub1Q8C0D0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trub1Q8C0D0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trub1Q8C0D0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trub1Q8C0D0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trub1Q8C0D0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trub1Q8C0D0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trub1Q8C0D0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trub1Q8C0D0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trub1Q8C0D0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trub1Q8C0D0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trub1Q8C0D0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trub1Q8C0D0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trub1Q8C0D0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trub1Q8C0D0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.72■□□□□ 0.75
Trub1Q8C0D0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trub1Q8C0D0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trub1Q8C0D0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trub1Q8C0D0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trub1Q8C0D0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trub1Q8C0D0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trub1Q8C0D0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trub1Q8C0D0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.72■□□□□ 0.75
Trub1Q8C0D0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trub1Q8C0D0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trub1Q8C0D0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trub1Q8C0D0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trub1Q8C0D0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trub1Q8C0D0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trub1Q8C0D0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trub1Q8C0D0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.71■□□□□ 0.75
Trub1Q8C0D0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trub1Q8C0D0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trub1Q8C0D0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trub1Q8C0D0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trub1Q8C0D0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trub1Q8C0D0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trub1Q8C0D0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trub1Q8C0D0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trub1Q8C0D0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trub1Q8C0D0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trub1Q8C0D0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trub1Q8C0D0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trub1Q8C0D0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trub1Q8C0D0 Gm43060-201ENSMUST00000200621 289 ntBASIC19.7■□□□□ 0.74
Trub1Q8C0D0 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.7■□□□□ 0.74
Trub1Q8C0D0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trub1Q8C0D0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trub1Q8C0D0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trub1Q8C0D0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trub1Q8C0D0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.7■□□□□ 0.74
Trub1Q8C0D0 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.69■□□□□ 0.74
Trub1Q8C0D0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.69■□□□□ 0.74
Trub1Q8C0D0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trub1Q8C0D0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trub1Q8C0D0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trub1Q8C0D0 Gm7860-201ENSMUST00000121190 879 ntBASIC19.69■□□□□ 0.74
Trub1Q8C0D0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.69■□□□□ 0.74
Trub1Q8C0D0 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.69■□□□□ 0.74
Trub1Q8C0D0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trub1Q8C0D0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trub1Q8C0D0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trub1Q8C0D0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trub1Q8C0D0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trub1Q8C0D0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trub1Q8C0D0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.68■□□□□ 0.74
Trub1Q8C0D0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trub1Q8C0D0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trub1Q8C0D0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.68■□□□□ 0.74
Trub1Q8C0D0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trub1Q8C0D0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trub1Q8C0D0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trub1Q8C0D0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trub1Q8C0D0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trub1Q8C0D0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms