Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.15■□□□□ 0.5
Cdk5rap1Q8BTW8 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.15■□□□□ 0.5
Cdk5rap1Q8BTW8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdk5rap1Q8BTW8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdk5rap1Q8BTW8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdk5rap1Q8BTW8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cdk5rap1Q8BTW8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cdk5rap1Q8BTW8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdk5rap1Q8BTW8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdk5rap1Q8BTW8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Cdk5rap1Q8BTW8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cdk5rap1Q8BTW8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Cdk5rap1Q8BTW8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdk5rap1Q8BTW8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdk5rap1Q8BTW8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdk5rap1Q8BTW8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk5rap1Q8BTW8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk5rap1Q8BTW8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk5rap1Q8BTW8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk5rap1Q8BTW8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk5rap1Q8BTW8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.13■□□□□ 0.49
Cdk5rap1Q8BTW8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk5rap1Q8BTW8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk5rap1Q8BTW8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk5rap1Q8BTW8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cdk5rap1Q8BTW8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk5rap1Q8BTW8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdk5rap1Q8BTW8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk5rap1Q8BTW8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk5rap1Q8BTW8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.12■□□□□ 0.49
Cdk5rap1Q8BTW8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.12■□□□□ 0.49
Cdk5rap1Q8BTW8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cdk5rap1Q8BTW8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cdk5rap1Q8BTW8 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.12■□□□□ 0.49
Cdk5rap1Q8BTW8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdk5rap1Q8BTW8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap1Q8BTW8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.11■□□□□ 0.49
Cdk5rap1Q8BTW8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.11■□□□□ 0.49
Cdk5rap1Q8BTW8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap1Q8BTW8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap1Q8BTW8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap1Q8BTW8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.11■□□□□ 0.49
Cdk5rap1Q8BTW8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.11■□□□□ 0.49
Cdk5rap1Q8BTW8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap1Q8BTW8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap1Q8BTW8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap1Q8BTW8 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.11■□□□□ 0.49
Cdk5rap1Q8BTW8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap1Q8BTW8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdk5rap1Q8BTW8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap1Q8BTW8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap1Q8BTW8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap1Q8BTW8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cdk5rap1Q8BTW8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap1Q8BTW8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.1■□□□□ 0.49
Cdk5rap1Q8BTW8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap1Q8BTW8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap1Q8BTW8 Mir5133-201ENSMUST00000174955 77 ntBASIC18.1■□□□□ 0.49
Cdk5rap1Q8BTW8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.1■□□□□ 0.49
Cdk5rap1Q8BTW8 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.1■□□□□ 0.49
Cdk5rap1Q8BTW8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap1Q8BTW8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap1Q8BTW8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cdk5rap1Q8BTW8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdk5rap1Q8BTW8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap1Q8BTW8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap1Q8BTW8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap1Q8BTW8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
Cdk5rap1Q8BTW8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.09■□□□□ 0.49
Cdk5rap1Q8BTW8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap1Q8BTW8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap1Q8BTW8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap1Q8BTW8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap1Q8BTW8 Gm6420-201ENSMUST00000193885 723 ntBASIC18.09■□□□□ 0.49
Cdk5rap1Q8BTW8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cdk5rap1Q8BTW8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap1Q8BTW8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdk5rap1Q8BTW8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cdk5rap1Q8BTW8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdk5rap1Q8BTW8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdk5rap1Q8BTW8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.08■□□□□ 0.48
Cdk5rap1Q8BTW8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk5rap1Q8BTW8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.08■□□□□ 0.48
Cdk5rap1Q8BTW8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cdk5rap1Q8BTW8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cdk5rap1Q8BTW8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk5rap1Q8BTW8 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.08■□□□□ 0.48
Cdk5rap1Q8BTW8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk5rap1Q8BTW8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk5rap1Q8BTW8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Cdk5rap1Q8BTW8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk5rap1Q8BTW8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cdk5rap1Q8BTW8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cdk5rap1Q8BTW8 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.08■□□□□ 0.48
Cdk5rap1Q8BTW8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Cdk5rap1Q8BTW8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk5rap1Q8BTW8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cdk5rap1Q8BTW8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk5rap1Q8BTW8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdk5rap1Q8BTW8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms