Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Gm12251-201ENSMUST00000117893 792 ntBASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc40Q8BI79 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc40Q8BI79 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.81■□□□□ 0.76
Ccdc40Q8BI79 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc40Q8BI79 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc40Q8BI79 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Ccdc40Q8BI79 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc40Q8BI79 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc40Q8BI79 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Ccdc40Q8BI79 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.81■□□□□ 0.76
Ccdc40Q8BI79 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc40Q8BI79 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc40Q8BI79 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc40Q8BI79 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc40Q8BI79 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc40Q8BI79 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc40Q8BI79 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.8■□□□□ 0.76
Ccdc40Q8BI79 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc40Q8BI79 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc40Q8BI79 Serp2-204ENSMUST00000228055 705 ntBASIC19.8■□□□□ 0.76
Ccdc40Q8BI79 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc40Q8BI79 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.8■□□□□ 0.76
Ccdc40Q8BI79 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc40Q8BI79 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc40Q8BI79 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc40Q8BI79 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc40Q8BI79 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc40Q8BI79 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc40Q8BI79 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc40Q8BI79 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc40Q8BI79 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc40Q8BI79 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc40Q8BI79 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc40Q8BI79 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc40Q8BI79 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc40Q8BI79 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc40Q8BI79 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc40Q8BI79 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc40Q8BI79 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Ccdc40Q8BI79 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc40Q8BI79 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc40Q8BI79 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.78■□□□□ 0.76
Ccdc40Q8BI79 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc40Q8BI79 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc40Q8BI79 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc40Q8BI79 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
Ccdc40Q8BI79 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Ccdc40Q8BI79 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc40Q8BI79 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc40Q8BI79 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.77■□□□□ 0.76
Ccdc40Q8BI79 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Ccdc40Q8BI79 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.77■□□□□ 0.76
Ccdc40Q8BI79 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Ccdc40Q8BI79 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc40Q8BI79 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc40Q8BI79 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc40Q8BI79 Mir7075-201ENSMUST00000184187 82 ntBASIC19.77■□□□□ 0.76
Ccdc40Q8BI79 Gm27454-201ENSMUST00000185090 204 ntBASIC19.77■□□□□ 0.76
Ccdc40Q8BI79 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ccdc40Q8BI79 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc40Q8BI79 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc40Q8BI79 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Ccdc40Q8BI79 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
Ccdc40Q8BI79 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc40Q8BI79 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc40Q8BI79 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc40Q8BI79 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc40Q8BI79 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.76■□□□□ 0.75
Ccdc40Q8BI79 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc40Q8BI79 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc40Q8BI79 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.76■□□□□ 0.75
Ccdc40Q8BI79 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc40Q8BI79 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc40Q8BI79 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc40Q8BI79 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc40Q8BI79 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc40Q8BI79 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc40Q8BI79 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc40Q8BI79 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc40Q8BI79 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.75■□□□□ 0.75
Ccdc40Q8BI79 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc40Q8BI79 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.75■□□□□ 0.75
Ccdc40Q8BI79 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms