Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim23Q8BGX0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim23Q8BGX0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.47■□□□□ 0.55
Trim23Q8BGX0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim23Q8BGX0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trim23Q8BGX0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trim23Q8BGX0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim23Q8BGX0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.47■□□□□ 0.55
Trim23Q8BGX0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim23Q8BGX0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim23Q8BGX0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim23Q8BGX0 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.46■□□□□ 0.55
Trim23Q8BGX0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim23Q8BGX0 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.46■□□□□ 0.55
Trim23Q8BGX0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim23Q8BGX0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim23Q8BGX0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim23Q8BGX0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trim23Q8BGX0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Trim23Q8BGX0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim23Q8BGX0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim23Q8BGX0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim23Q8BGX0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Trim23Q8BGX0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trim23Q8BGX0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim23Q8BGX0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trim23Q8BGX0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim23Q8BGX0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim23Q8BGX0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim23Q8BGX0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.44■□□□□ 0.54
Trim23Q8BGX0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim23Q8BGX0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim23Q8BGX0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim23Q8BGX0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim23Q8BGX0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trim23Q8BGX0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim23Q8BGX0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim23Q8BGX0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim23Q8BGX0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim23Q8BGX0 Gm27405-201ENSMUST00000184201 112 ntBASIC18.43■□□□□ 0.54
Trim23Q8BGX0 Gm42569-201ENSMUST00000200539 472 ntBASIC18.43■□□□□ 0.54
Trim23Q8BGX0 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.43■□□□□ 0.54
Trim23Q8BGX0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim23Q8BGX0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim23Q8BGX0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim23Q8BGX0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim23Q8BGX0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim23Q8BGX0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim23Q8BGX0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim23Q8BGX0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim23Q8BGX0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim23Q8BGX0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim23Q8BGX0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim23Q8BGX0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim23Q8BGX0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim23Q8BGX0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim23Q8BGX0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim23Q8BGX0 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.41■□□□□ 0.54
Trim23Q8BGX0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim23Q8BGX0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim23Q8BGX0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim23Q8BGX0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim23Q8BGX0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim23Q8BGX0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim23Q8BGX0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim23Q8BGX0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Trim23Q8BGX0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim23Q8BGX0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim23Q8BGX0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim23Q8BGX0 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.4■□□□□ 0.54
Trim23Q8BGX0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.4■□□□□ 0.54
Trim23Q8BGX0 Gm13534-201ENSMUST00000121169 513 ntBASIC18.4■□□□□ 0.54
Trim23Q8BGX0 Gm7291-201ENSMUST00000199147 382 ntBASIC18.4■□□□□ 0.54
Trim23Q8BGX0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim23Q8BGX0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim23Q8BGX0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim23Q8BGX0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim23Q8BGX0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim23Q8BGX0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim23Q8BGX0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim23Q8BGX0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trim23Q8BGX0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Trim23Q8BGX0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms