Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trim6Q8BGE7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim6Q8BGE7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim6Q8BGE7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim6Q8BGE7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim6Q8BGE7 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.26■□□□□ 0.83
Trim6Q8BGE7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim6Q8BGE7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Trim6Q8BGE7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim6Q8BGE7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim6Q8BGE7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Trim6Q8BGE7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim6Q8BGE7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.25■□□□□ 0.83
Trim6Q8BGE7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim6Q8BGE7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.25■□□□□ 0.83
Trim6Q8BGE7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim6Q8BGE7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim6Q8BGE7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim6Q8BGE7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim6Q8BGE7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim6Q8BGE7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Trim6Q8BGE7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trim6Q8BGE7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim6Q8BGE7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim6Q8BGE7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim6Q8BGE7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim6Q8BGE7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim6Q8BGE7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.24■□□□□ 0.83
Trim6Q8BGE7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim6Q8BGE7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim6Q8BGE7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim6Q8BGE7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.24■□□□□ 0.83
Trim6Q8BGE7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim6Q8BGE7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim6Q8BGE7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim6Q8BGE7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim6Q8BGE7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim6Q8BGE7 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.23■□□□□ 0.83
Trim6Q8BGE7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.23■□□□□ 0.83
Trim6Q8BGE7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim6Q8BGE7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Trim6Q8BGE7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim6Q8BGE7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim6Q8BGE7 Gm5812-201ENSMUST00000061073 957 ntBASIC20.23■□□□□ 0.83
Trim6Q8BGE7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
Trim6Q8BGE7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim6Q8BGE7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.23■□□□□ 0.83
Trim6Q8BGE7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trim6Q8BGE7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim6Q8BGE7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim6Q8BGE7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim6Q8BGE7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim6Q8BGE7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim6Q8BGE7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim6Q8BGE7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim6Q8BGE7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim6Q8BGE7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim6Q8BGE7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Trim6Q8BGE7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim6Q8BGE7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim6Q8BGE7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim6Q8BGE7 Gm15546-201ENSMUST00000122095 826 ntBASIC20.21■□□□□ 0.83
Trim6Q8BGE7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim6Q8BGE7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim6Q8BGE7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim6Q8BGE7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim6Q8BGE7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim6Q8BGE7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim6Q8BGE7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
Trim6Q8BGE7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim6Q8BGE7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim6Q8BGE7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim6Q8BGE7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim6Q8BGE7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim6Q8BGE7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim6Q8BGE7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim6Q8BGE7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim6Q8BGE7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim6Q8BGE7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim6Q8BGE7 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.18■□□□□ 0.82
Trim6Q8BGE7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim6Q8BGE7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim6Q8BGE7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim6Q8BGE7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms