Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.62■□□□□ 0.57
Trim50Q810I2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim50Q810I2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.62■□□□□ 0.57
Trim50Q810I2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Trim50Q810I2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim50Q810I2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim50Q810I2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim50Q810I2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim50Q810I2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.62■□□□□ 0.57
Trim50Q810I2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim50Q810I2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim50Q810I2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim50Q810I2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trim50Q810I2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trim50Q810I2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim50Q810I2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim50Q810I2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim50Q810I2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim50Q810I2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim50Q810I2 Gm27801-201ENSMUST00000184174 223 ntBASIC18.61■□□□□ 0.57
Trim50Q810I2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.61■□□□□ 0.57
Trim50Q810I2 Gm43060-201ENSMUST00000200621 289 ntBASIC18.61■□□□□ 0.57
Trim50Q810I2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim50Q810I2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trim50Q810I2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim50Q810I2 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.61■□□□□ 0.57
Trim50Q810I2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim50Q810I2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim50Q810I2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim50Q810I2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim50Q810I2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim50Q810I2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.6■□□□□ 0.57
Trim50Q810I2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Trim50Q810I2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.6■□□□□ 0.57
Trim50Q810I2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim50Q810I2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.6■□□□□ 0.57
Trim50Q810I2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim50Q810I2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim50Q810I2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim50Q810I2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim50Q810I2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim50Q810I2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim50Q810I2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim50Q810I2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim50Q810I2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim50Q810I2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim50Q810I2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim50Q810I2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim50Q810I2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim50Q810I2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trim50Q810I2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim50Q810I2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim50Q810I2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim50Q810I2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim50Q810I2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Trim50Q810I2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim50Q810I2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
Trim50Q810I2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim50Q810I2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.58■□□□□ 0.56
Trim50Q810I2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim50Q810I2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Trim50Q810I2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim50Q810I2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim50Q810I2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim50Q810I2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Trim50Q810I2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim50Q810I2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim50Q810I2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim50Q810I2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.57■□□□□ 0.56
Trim50Q810I2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
Trim50Q810I2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.57■□□□□ 0.56
Trim50Q810I2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim50Q810I2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim50Q810I2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim50Q810I2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim50Q810I2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trim50Q810I2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.56■□□□□ 0.56
Trim50Q810I2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim50Q810I2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim50Q810I2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Trim50Q810I2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim50Q810I2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.56■□□□□ 0.56
Trim50Q810I2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Trim50Q810I2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim50Q810I2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim50Q810I2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.56■□□□□ 0.56
Trim50Q810I2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim50Q810I2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim50Q810I2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Trim50Q810I2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim50Q810I2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim50Q810I2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim50Q810I2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim50Q810I2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim50Q810I2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim50Q810I2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim50Q810I2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trim50Q810I2 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.55■□□□□ 0.56
Trim50Q810I2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim50Q810I2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms