Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk1Q80X41 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk1Q80X41 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Vrk1Q80X41 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.25■□□□□ 0.51
Vrk1Q80X41 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.25■□□□□ 0.51
Vrk1Q80X41 Gm5408-201ENSMUST00000197998 747 ntBASIC18.25■□□□□ 0.51
Vrk1Q80X41 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk1Q80X41 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk1Q80X41 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vrk1Q80X41 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Vrk1Q80X41 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vrk1Q80X41 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vrk1Q80X41 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vrk1Q80X41 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.24■□□□□ 0.51
Vrk1Q80X41 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vrk1Q80X41 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vrk1Q80X41 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vrk1Q80X41 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vrk1Q80X41 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vrk1Q80X41 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vrk1Q80X41 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vrk1Q80X41 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vrk1Q80X41 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Vrk1Q80X41 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vrk1Q80X41 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vrk1Q80X41 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vrk1Q80X41 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vrk1Q80X41 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.23■□□□□ 0.51
Vrk1Q80X41 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vrk1Q80X41 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.23■□□□□ 0.51
Vrk1Q80X41 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.23■□□□□ 0.51
Vrk1Q80X41 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Vrk1Q80X41 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vrk1Q80X41 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vrk1Q80X41 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Vrk1Q80X41 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vrk1Q80X41 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vrk1Q80X41 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vrk1Q80X41 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Vrk1Q80X41 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vrk1Q80X41 Gm20760-201ENSMUST00000179197 648 ntBASIC18.22■□□□□ 0.51
Vrk1Q80X41 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vrk1Q80X41 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vrk1Q80X41 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.22■□□□□ 0.51
Vrk1Q80X41 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vrk1Q80X41 Iqck-206ENSMUST00000208658 2891 ntBASIC18.22■□□□□ 0.51
Vrk1Q80X41 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vrk1Q80X41 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.22■□□□□ 0.51
Vrk1Q80X41 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vrk1Q80X41 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vrk1Q80X41 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Vrk1Q80X41 Gm12527-201ENSMUST00000117967 564 ntBASIC18.21■□□□□ 0.51
Vrk1Q80X41 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vrk1Q80X41 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vrk1Q80X41 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vrk1Q80X41 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.21■□□□□ 0.51
Vrk1Q80X41 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vrk1Q80X41 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Vrk1Q80X41 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vrk1Q80X41 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.2■□□□□ 0.5
Vrk1Q80X41 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vrk1Q80X41 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vrk1Q80X41 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vrk1Q80X41 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Vrk1Q80X41 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Vrk1Q80X41 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vrk1Q80X41 Gm6211-202ENSMUST00000167849 925 ntBASIC18.2■□□□□ 0.5
Vrk1Q80X41 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vrk1Q80X41 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Vrk1Q80X41 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.2■□□□□ 0.5
Vrk1Q80X41 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vrk1Q80X41 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Vrk1Q80X41 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Vrk1Q80X41 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vrk1Q80X41 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vrk1Q80X41 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vrk1Q80X41 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.19■□□□□ 0.5
Vrk1Q80X41 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vrk1Q80X41 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vrk1Q80X41 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vrk1Q80X41 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vrk1Q80X41 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.19■□□□□ 0.5
Vrk1Q80X41 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vrk1Q80X41 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vrk1Q80X41 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vrk1Q80X41 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vrk1Q80X41 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vrk1Q80X41 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vrk1Q80X41 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vrk1Q80X41 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.19■□□□□ 0.5
Vrk1Q80X41 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Vrk1Q80X41 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vrk1Q80X41 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vrk1Q80X41 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Vrk1Q80X41 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.18■□□□□ 0.5
Vrk1Q80X41 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vrk1Q80X41 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vrk1Q80X41 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vrk1Q80X41 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vrk1Q80X41 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms