Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim36Q80WG7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim36Q80WG7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim36Q80WG7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim36Q80WG7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim36Q80WG7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim36Q80WG7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim36Q80WG7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim36Q80WG7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim36Q80WG7 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.41■□□□□ 0.54
Trim36Q80WG7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trim36Q80WG7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim36Q80WG7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim36Q80WG7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim36Q80WG7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim36Q80WG7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim36Q80WG7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Trim36Q80WG7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim36Q80WG7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim36Q80WG7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Trim36Q80WG7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim36Q80WG7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim36Q80WG7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Trim36Q80WG7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim36Q80WG7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim36Q80WG7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim36Q80WG7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim36Q80WG7 Mir7075-201ENSMUST00000184187 82 ntBASIC18.39■□□□□ 0.53
Trim36Q80WG7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim36Q80WG7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim36Q80WG7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim36Q80WG7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim36Q80WG7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim36Q80WG7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trim36Q80WG7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trim36Q80WG7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim36Q80WG7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim36Q80WG7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.38■□□□□ 0.53
Trim36Q80WG7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trim36Q80WG7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim36Q80WG7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.38■□□□□ 0.53
Trim36Q80WG7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim36Q80WG7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trim36Q80WG7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim36Q80WG7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim36Q80WG7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim36Q80WG7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim36Q80WG7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim36Q80WG7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim36Q80WG7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Trim36Q80WG7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim36Q80WG7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim36Q80WG7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim36Q80WG7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim36Q80WG7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim36Q80WG7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim36Q80WG7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Trim36Q80WG7 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.36■□□□□ 0.53
Trim36Q80WG7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim36Q80WG7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim36Q80WG7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim36Q80WG7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trim36Q80WG7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim36Q80WG7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim36Q80WG7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim36Q80WG7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.35■□□□□ 0.53
Trim36Q80WG7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim36Q80WG7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim36Q80WG7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim36Q80WG7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim36Q80WG7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Trim36Q80WG7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim36Q80WG7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim36Q80WG7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim36Q80WG7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim36Q80WG7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim36Q80WG7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.34■□□□□ 0.53
Trim36Q80WG7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Trim36Q80WG7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim36Q80WG7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim36Q80WG7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim36Q80WG7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim36Q80WG7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim36Q80WG7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Trim36Q80WG7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim36Q80WG7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim36Q80WG7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim36Q80WG7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim36Q80WG7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim36Q80WG7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim36Q80WG7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim36Q80WG7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim36Q80WG7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trim36Q80WG7 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.32■□□□□ 0.52
Trim36Q80WG7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim36Q80WG7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim36Q80WG7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.32■□□□□ 0.52
Trim36Q80WG7 Gm43017-201ENSMUST00000198296 752 ntBASIC18.32■□□□□ 0.52
Trim36Q80WG7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim36Q80WG7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms