Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Otop1Q80VM9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
Otop1Q80VM9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Otop1Q80VM9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Otop1Q80VM9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Otop1Q80VM9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Otop1Q80VM9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Otop1Q80VM9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Otop1Q80VM9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Otop1Q80VM9 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.34■□□□□ 0.53
Otop1Q80VM9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Otop1Q80VM9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Otop1Q80VM9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Otop1Q80VM9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Otop1Q80VM9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Otop1Q80VM9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Otop1Q80VM9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Otop1Q80VM9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Otop1Q80VM9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Otop1Q80VM9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Otop1Q80VM9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Otop1Q80VM9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
Otop1Q80VM9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Otop1Q80VM9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.33■□□□□ 0.52
Otop1Q80VM9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Otop1Q80VM9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Otop1Q80VM9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Otop1Q80VM9 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.33■□□□□ 0.52
Otop1Q80VM9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Otop1Q80VM9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Otop1Q80VM9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Otop1Q80VM9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Otop1Q80VM9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Otop1Q80VM9 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.32■□□□□ 0.52
Otop1Q80VM9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Otop1Q80VM9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Otop1Q80VM9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.32■□□□□ 0.52
Otop1Q80VM9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Otop1Q80VM9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Otop1Q80VM9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
Otop1Q80VM9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Otop1Q80VM9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Otop1Q80VM9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Otop1Q80VM9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Otop1Q80VM9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Otop1Q80VM9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.31■□□□□ 0.52
Otop1Q80VM9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Otop1Q80VM9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.31■□□□□ 0.52
Otop1Q80VM9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Otop1Q80VM9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Otop1Q80VM9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Otop1Q80VM9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Otop1Q80VM9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Otop1Q80VM9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Otop1Q80VM9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Otop1Q80VM9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Otop1Q80VM9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Otop1Q80VM9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Otop1Q80VM9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.3■□□□□ 0.52
Otop1Q80VM9 Gm7977-201ENSMUST00000193787 748 ntBASIC18.3■□□□□ 0.52
Otop1Q80VM9 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.3■□□□□ 0.52
Otop1Q80VM9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
Otop1Q80VM9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.3■□□□□ 0.52
Otop1Q80VM9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Otop1Q80VM9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Otop1Q80VM9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Otop1Q80VM9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Otop1Q80VM9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Otop1Q80VM9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Otop1Q80VM9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Otop1Q80VM9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Otop1Q80VM9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Otop1Q80VM9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Otop1Q80VM9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Otop1Q80VM9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Otop1Q80VM9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Otop1Q80VM9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Otop1Q80VM9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Otop1Q80VM9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Otop1Q80VM9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Otop1Q80VM9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Otop1Q80VM9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Otop1Q80VM9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Otop1Q80VM9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Otop1Q80VM9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Otop1Q80VM9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Otop1Q80VM9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Otop1Q80VM9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.27■□□□□ 0.52
Otop1Q80VM9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.27■□□□□ 0.52
Otop1Q80VM9 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.27■□□□□ 0.52
Otop1Q80VM9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.27■□□□□ 0.52
Otop1Q80VM9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Otop1Q80VM9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Otop1Q80VM9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Otop1Q80VM9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Otop1Q80VM9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Otop1Q80VM9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Otop1Q80VM9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Otop1Q80VM9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Otop1Q80VM9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms