Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm4Q80V63 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm4Q80V63 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm4Q80V63 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.79■□□□□ 0.76
Prdm4Q80V63 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm4Q80V63 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm4Q80V63 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm4Q80V63 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.79■□□□□ 0.76
Prdm4Q80V63 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm4Q80V63 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prdm4Q80V63 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm4Q80V63 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm4Q80V63 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm4Q80V63 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Prdm4Q80V63 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.78■□□□□ 0.76
Prdm4Q80V63 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Prdm4Q80V63 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.78■□□□□ 0.76
Prdm4Q80V63 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.78■□□□□ 0.76
Prdm4Q80V63 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prdm4Q80V63 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Prdm4Q80V63 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Prdm4Q80V63 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.77■□□□□ 0.76
Prdm4Q80V63 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm4Q80V63 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.77■□□□□ 0.76
Prdm4Q80V63 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Prdm4Q80V63 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.77■□□□□ 0.76
Prdm4Q80V63 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.77■□□□□ 0.76
Prdm4Q80V63 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm4Q80V63 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.76■□□□□ 0.75
Prdm4Q80V63 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.76■□□□□ 0.75
Prdm4Q80V63 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Prdm4Q80V63 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prdm4Q80V63 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prdm4Q80V63 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prdm4Q80V63 Gm7143-201ENSMUST00000222811 859 ntBASIC19.75■□□□□ 0.75
Prdm4Q80V63 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prdm4Q80V63 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Prdm4Q80V63 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Prdm4Q80V63 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.74■□□□□ 0.75
Prdm4Q80V63 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prdm4Q80V63 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Prdm4Q80V63 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prdm4Q80V63 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.74■□□□□ 0.75
Prdm4Q80V63 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Prdm4Q80V63 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Prdm4Q80V63 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prdm4Q80V63 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prdm4Q80V63 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prdm4Q80V63 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Prdm4Q80V63 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Prdm4Q80V63 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.74■□□□□ 0.75
Prdm4Q80V63 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Prdm4Q80V63 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prdm4Q80V63 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prdm4Q80V63 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prdm4Q80V63 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Prdm4Q80V63 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prdm4Q80V63 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prdm4Q80V63 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prdm4Q80V63 Etf1-202ENSMUST00000180351 108 ntBASIC19.72■□□□□ 0.75
Prdm4Q80V63 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.72■□□□□ 0.75
Prdm4Q80V63 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prdm4Q80V63 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Prdm4Q80V63 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prdm4Q80V63 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prdm4Q80V63 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.71■□□□□ 0.75
Prdm4Q80V63 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.71■□□□□ 0.75
Prdm4Q80V63 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Prdm4Q80V63 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Prdm4Q80V63 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms