Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.78■□□□□ 0.6
Pcdh19Q80TF3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdh19Q80TF3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdh19Q80TF3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdh19Q80TF3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh19Q80TF3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh19Q80TF3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh19Q80TF3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh19Q80TF3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh19Q80TF3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Pcdh19Q80TF3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh19Q80TF3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh19Q80TF3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh19Q80TF3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdh19Q80TF3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh19Q80TF3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh19Q80TF3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdh19Q80TF3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Pcdh19Q80TF3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh19Q80TF3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh19Q80TF3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh19Q80TF3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Pcdh19Q80TF3 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.76■□□□□ 0.59
Pcdh19Q80TF3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh19Q80TF3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh19Q80TF3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh19Q80TF3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh19Q80TF3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh19Q80TF3 Gm7860-201ENSMUST00000121190 879 ntBASIC18.75■□□□□ 0.59
Pcdh19Q80TF3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Pcdh19Q80TF3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh19Q80TF3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh19Q80TF3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh19Q80TF3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdh19Q80TF3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh19Q80TF3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh19Q80TF3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh19Q80TF3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh19Q80TF3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh19Q80TF3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdh19Q80TF3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh19Q80TF3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh19Q80TF3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdh19Q80TF3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh19Q80TF3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh19Q80TF3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdh19Q80TF3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdh19Q80TF3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.73■□□□□ 0.59
Pcdh19Q80TF3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh19Q80TF3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh19Q80TF3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh19Q80TF3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh19Q80TF3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh19Q80TF3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdh19Q80TF3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdh19Q80TF3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh19Q80TF3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh19Q80TF3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdh19Q80TF3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh19Q80TF3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh19Q80TF3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh19Q80TF3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.72■□□□□ 0.59
Pcdh19Q80TF3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdh19Q80TF3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh19Q80TF3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh19Q80TF3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh19Q80TF3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Pcdh19Q80TF3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdh19Q80TF3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh19Q80TF3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh19Q80TF3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh19Q80TF3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh19Q80TF3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh19Q80TF3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdh19Q80TF3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.71■□□□□ 0.59
Pcdh19Q80TF3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdh19Q80TF3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Mir5133-201ENSMUST00000174955 77 ntBASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh19Q80TF3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pcdh19Q80TF3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh19Q80TF3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh19Q80TF3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
Pcdh19Q80TF3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh19Q80TF3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms