Protein–RNA interactions for Protein: Q7TN37

Trpm4, Transient receptor potential cation channel subfamily M member 4, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm4Q7TN37 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Trpm4Q7TN37 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trpm4Q7TN37 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.5■□□□□ 0.71
Trpm4Q7TN37 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.5■□□□□ 0.71
Trpm4Q7TN37 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.5■□□□□ 0.71
Trpm4Q7TN37 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpm4Q7TN37 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpm4Q7TN37 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trpm4Q7TN37 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpm4Q7TN37 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpm4Q7TN37 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpm4Q7TN37 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpm4Q7TN37 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpm4Q7TN37 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.49■□□□□ 0.71
Trpm4Q7TN37 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Trpm4Q7TN37 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trpm4Q7TN37 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trpm4Q7TN37 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trpm4Q7TN37 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm4Q7TN37 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm4Q7TN37 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm4Q7TN37 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm4Q7TN37 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm4Q7TN37 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm4Q7TN37 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.48■□□□□ 0.71
Trpm4Q7TN37 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.48■□□□□ 0.71
Trpm4Q7TN37 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trpm4Q7TN37 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm4Q7TN37 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm4Q7TN37 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm4Q7TN37 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpm4Q7TN37 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm4Q7TN37 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm4Q7TN37 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm4Q7TN37 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
Trpm4Q7TN37 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm4Q7TN37 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trpm4Q7TN37 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.47■□□□□ 0.71
Trpm4Q7TN37 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm4Q7TN37 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm4Q7TN37 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm4Q7TN37 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trpm4Q7TN37 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm4Q7TN37 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpm4Q7TN37 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trpm4Q7TN37 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.46■□□□□ 0.71
Trpm4Q7TN37 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trpm4Q7TN37 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.46■□□□□ 0.71
Trpm4Q7TN37 Gm26571-201ENSMUST00000181399 666 ntBASIC19.46■□□□□ 0.71
Trpm4Q7TN37 Gm37179-201ENSMUST00000194862 823 ntBASIC19.46■□□□□ 0.71
Trpm4Q7TN37 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpm4Q7TN37 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpm4Q7TN37 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpm4Q7TN37 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpm4Q7TN37 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Trpm4Q7TN37 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpm4Q7TN37 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpm4Q7TN37 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpm4Q7TN37 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm4Q7TN37 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm4Q7TN37 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trpm4Q7TN37 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm4Q7TN37 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm4Q7TN37 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm4Q7TN37 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm4Q7TN37 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm4Q7TN37 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm4Q7TN37 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm4Q7TN37 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpm4Q7TN37 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm4Q7TN37 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm4Q7TN37 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm4Q7TN37 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm4Q7TN37 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm4Q7TN37 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm4Q7TN37 Gm10849-201ENSMUST00000100397 618 ntBASIC19.44■□□□□ 0.7
Trpm4Q7TN37 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm4Q7TN37 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm4Q7TN37 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm4Q7TN37 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trpm4Q7TN37 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpm4Q7TN37 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.43■□□□□ 0.7
Trpm4Q7TN37 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpm4Q7TN37 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms