Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Scn10aQ6QIY3 Gm18666-201ENSMUST00000190039 958 ntBASIC22.04■■□□□ 1.12
Scn10aQ6QIY3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Scn10aQ6QIY3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Scn10aQ6QIY3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC22.03■■□□□ 1.12
Scn10aQ6QIY3 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.03■■□□□ 1.12
Scn10aQ6QIY3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Scn10aQ6QIY3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Scn10aQ6QIY3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
Scn10aQ6QIY3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Scn10aQ6QIY3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Scn10aQ6QIY3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Scn10aQ6QIY3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Scn10aQ6QIY3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
Scn10aQ6QIY3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Scn10aQ6QIY3 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.03■■□□□ 1.12
Scn10aQ6QIY3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Scn10aQ6QIY3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Scn10aQ6QIY3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Scn10aQ6QIY3 Gm32699-201ENSMUST00000221728 1988 ntBASIC22.02■■□□□ 1.12
Scn10aQ6QIY3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC22.02■■□□□ 1.12
Scn10aQ6QIY3 AL672049.1-201ENSMUST00000197943 91 ntBASIC22.02■■□□□ 1.12
Scn10aQ6QIY3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Scn10aQ6QIY3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Scn10aQ6QIY3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Scn10aQ6QIY3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Scn10aQ6QIY3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Scn10aQ6QIY3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Scn10aQ6QIY3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Scn10aQ6QIY3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Scn10aQ6QIY3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Scn10aQ6QIY3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Scn10aQ6QIY3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Scn10aQ6QIY3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC22.01■■□□□ 1.11
Scn10aQ6QIY3 Gm11643-201ENSMUST00000119578 864 ntBASIC22.01■■□□□ 1.11
Scn10aQ6QIY3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Scn10aQ6QIY3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Scn10aQ6QIY3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22■■□□□ 1.11
Scn10aQ6QIY3 Nrn1-203ENSMUST00000223611 1443 ntBASIC22■■□□□ 1.11
Scn10aQ6QIY3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC22■■□□□ 1.11
Scn10aQ6QIY3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC22■■□□□ 1.11
Scn10aQ6QIY3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC22■■□□□ 1.11
Scn10aQ6QIY3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC22■■□□□ 1.11
Scn10aQ6QIY3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Scn10aQ6QIY3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC22■■□□□ 1.11
Scn10aQ6QIY3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Scn10aQ6QIY3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22■■□□□ 1.11
Scn10aQ6QIY3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22■■□□□ 1.11
Scn10aQ6QIY3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Scn10aQ6QIY3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Scn10aQ6QIY3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC22■■□□□ 1.11
Scn10aQ6QIY3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.99■■□□□ 1.11
Scn10aQ6QIY3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.99■■□□□ 1.11
Scn10aQ6QIY3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scn10aQ6QIY3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.99■■□□□ 1.11
Scn10aQ6QIY3 Mir5122-201ENSMUST00000175004 89 ntBASIC21.99■■□□□ 1.11
Scn10aQ6QIY3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Scn10aQ6QIY3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scn10aQ6QIY3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scn10aQ6QIY3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn10aQ6QIY3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.98■■□□□ 1.11
Scn10aQ6QIY3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.98■■□□□ 1.11
Scn10aQ6QIY3 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.98■■□□□ 1.11
Scn10aQ6QIY3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn10aQ6QIY3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn10aQ6QIY3 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.98■■□□□ 1.11
Scn10aQ6QIY3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn10aQ6QIY3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.98■■□□□ 1.11
Scn10aQ6QIY3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scn10aQ6QIY3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scn10aQ6QIY3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.97■■□□□ 1.11
Scn10aQ6QIY3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.97■■□□□ 1.11
Scn10aQ6QIY3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.97■■□□□ 1.11
Scn10aQ6QIY3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.97■■□□□ 1.11
Scn10aQ6QIY3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.97■■□□□ 1.11
Scn10aQ6QIY3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn10aQ6QIY3 Gm13158-201ENSMUST00000122007 736 ntBASIC21.96■■□□□ 1.11
Scn10aQ6QIY3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn10aQ6QIY3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Scn10aQ6QIY3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Scn10aQ6QIY3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn10aQ6QIY3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.96■■□□□ 1.11
Scn10aQ6QIY3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.96■■□□□ 1.11
Scn10aQ6QIY3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
Scn10aQ6QIY3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms