Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.07■□□□□ 0.48
Rnf220Q6PDX6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf220Q6PDX6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rnf220Q6PDX6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rnf220Q6PDX6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf220Q6PDX6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.06■□□□□ 0.48
Rnf220Q6PDX6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf220Q6PDX6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf220Q6PDX6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf220Q6PDX6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf220Q6PDX6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.06■□□□□ 0.48
Rnf220Q6PDX6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rnf220Q6PDX6 Gm5921-201ENSMUST00000075898 882 ntBASIC18.06■□□□□ 0.48
Rnf220Q6PDX6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rnf220Q6PDX6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf220Q6PDX6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf220Q6PDX6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.06■□□□□ 0.48
Rnf220Q6PDX6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf220Q6PDX6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf220Q6PDX6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf220Q6PDX6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf220Q6PDX6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf220Q6PDX6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.04■□□□□ 0.48
Rnf220Q6PDX6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf220Q6PDX6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf220Q6PDX6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf220Q6PDX6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf220Q6PDX6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Rnf220Q6PDX6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rnf220Q6PDX6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf220Q6PDX6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf220Q6PDX6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf220Q6PDX6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf220Q6PDX6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf220Q6PDX6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf220Q6PDX6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rnf220Q6PDX6 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.03■□□□□ 0.48
Rnf220Q6PDX6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf220Q6PDX6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf220Q6PDX6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf220Q6PDX6 Gm13238-201ENSMUST00000117655 780 ntBASIC18.03■□□□□ 0.48
Rnf220Q6PDX6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.03■□□□□ 0.48
Rnf220Q6PDX6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf220Q6PDX6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf220Q6PDX6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf220Q6PDX6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf220Q6PDX6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Rnf220Q6PDX6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf220Q6PDX6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rnf220Q6PDX6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf220Q6PDX6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf220Q6PDX6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.02■□□□□ 0.48
Rnf220Q6PDX6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf220Q6PDX6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf220Q6PDX6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf220Q6PDX6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Rnf220Q6PDX6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf220Q6PDX6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rnf220Q6PDX6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf220Q6PDX6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf220Q6PDX6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rnf220Q6PDX6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rnf220Q6PDX6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf220Q6PDX6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf220Q6PDX6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18■□□□□ 0.47
Rnf220Q6PDX6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18■□□□□ 0.47
Rnf220Q6PDX6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf220Q6PDX6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf220Q6PDX6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf220Q6PDX6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf220Q6PDX6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Gm10399-202ENSMUST00000202768 748 ntBASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf220Q6PDX6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms