Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sp140Q6NSQ5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sp140Q6NSQ5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sp140Q6NSQ5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sp140Q6NSQ5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sp140Q6NSQ5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sp140Q6NSQ5 Gm6139-201ENSMUST00000079261 882 ntBASIC19.41■□□□□ 0.7
Sp140Q6NSQ5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.41■□□□□ 0.7
Sp140Q6NSQ5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sp140Q6NSQ5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sp140Q6NSQ5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sp140Q6NSQ5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sp140Q6NSQ5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sp140Q6NSQ5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sp140Q6NSQ5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Sp140Q6NSQ5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sp140Q6NSQ5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sp140Q6NSQ5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sp140Q6NSQ5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sp140Q6NSQ5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Sp140Q6NSQ5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Sp140Q6NSQ5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sp140Q6NSQ5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sp140Q6NSQ5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sp140Q6NSQ5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sp140Q6NSQ5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Sp140Q6NSQ5 Gm11421-201ENSMUST00000122124 294 ntBASIC19.38■□□□□ 0.69
Sp140Q6NSQ5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sp140Q6NSQ5 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.38■□□□□ 0.69
Sp140Q6NSQ5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sp140Q6NSQ5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sp140Q6NSQ5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sp140Q6NSQ5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sp140Q6NSQ5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sp140Q6NSQ5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.37■□□□□ 0.69
Sp140Q6NSQ5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sp140Q6NSQ5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sp140Q6NSQ5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sp140Q6NSQ5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
Sp140Q6NSQ5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sp140Q6NSQ5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sp140Q6NSQ5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sp140Q6NSQ5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sp140Q6NSQ5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sp140Q6NSQ5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sp140Q6NSQ5 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.36■□□□□ 0.69
Sp140Q6NSQ5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Sp140Q6NSQ5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sp140Q6NSQ5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sp140Q6NSQ5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Sp140Q6NSQ5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.36■□□□□ 0.69
Sp140Q6NSQ5 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.36■□□□□ 0.69
Sp140Q6NSQ5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sp140Q6NSQ5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sp140Q6NSQ5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sp140Q6NSQ5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sp140Q6NSQ5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sp140Q6NSQ5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sp140Q6NSQ5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sp140Q6NSQ5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Sp140Q6NSQ5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sp140Q6NSQ5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sp140Q6NSQ5 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sp140Q6NSQ5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sp140Q6NSQ5 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.34■□□□□ 0.69
Sp140Q6NSQ5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sp140Q6NSQ5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Sp140Q6NSQ5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sp140Q6NSQ5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
Sp140Q6NSQ5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sp140Q6NSQ5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sp140Q6NSQ5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.34■□□□□ 0.69
Sp140Q6NSQ5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sp140Q6NSQ5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sp140Q6NSQ5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sp140Q6NSQ5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sp140Q6NSQ5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sp140Q6NSQ5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sp140Q6NSQ5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Sp140Q6NSQ5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sp140Q6NSQ5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Sp140Q6NSQ5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sp140Q6NSQ5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Sp140Q6NSQ5 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.33■□□□□ 0.68
Sp140Q6NSQ5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms