Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retreg2Q6NS82 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.53■□□□□ 0.88
Retreg2Q6NS82 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Retreg2Q6NS82 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.52■□□□□ 0.88
Retreg2Q6NS82 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retreg2Q6NS82 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retreg2Q6NS82 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Retreg2Q6NS82 Gm7291-201ENSMUST00000199147 382 ntBASIC20.52■□□□□ 0.88
Retreg2Q6NS82 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retreg2Q6NS82 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.52■□□□□ 0.88
Retreg2Q6NS82 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retreg2Q6NS82 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retreg2Q6NS82 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Retreg2Q6NS82 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retreg2Q6NS82 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg2Q6NS82 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg2Q6NS82 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.51■□□□□ 0.87
Retreg2Q6NS82 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg2Q6NS82 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg2Q6NS82 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.51■□□□□ 0.87
Retreg2Q6NS82 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Retreg2Q6NS82 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg2Q6NS82 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg2Q6NS82 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.51■□□□□ 0.87
Retreg2Q6NS82 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retreg2Q6NS82 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg2Q6NS82 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.5■□□□□ 0.87
Retreg2Q6NS82 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg2Q6NS82 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg2Q6NS82 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg2Q6NS82 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg2Q6NS82 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg2Q6NS82 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retreg2Q6NS82 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg2Q6NS82 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg2Q6NS82 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg2Q6NS82 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg2Q6NS82 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg2Q6NS82 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Retreg2Q6NS82 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg2Q6NS82 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Retreg2Q6NS82 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg2Q6NS82 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg2Q6NS82 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg2Q6NS82 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.49■□□□□ 0.87
Retreg2Q6NS82 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Retreg2Q6NS82 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg2Q6NS82 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retreg2Q6NS82 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg2Q6NS82 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg2Q6NS82 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg2Q6NS82 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg2Q6NS82 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.48■□□□□ 0.87
Retreg2Q6NS82 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.48■□□□□ 0.87
Retreg2Q6NS82 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg2Q6NS82 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retreg2Q6NS82 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retreg2Q6NS82 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retreg2Q6NS82 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.47■□□□□ 0.87
Retreg2Q6NS82 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retreg2Q6NS82 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retreg2Q6NS82 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retreg2Q6NS82 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retreg2Q6NS82 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retreg2Q6NS82 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retreg2Q6NS82 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Retreg2Q6NS82 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retreg2Q6NS82 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Retreg2Q6NS82 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retreg2Q6NS82 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.46■□□□□ 0.87
Retreg2Q6NS82 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retreg2Q6NS82 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retreg2Q6NS82 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retreg2Q6NS82 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retreg2Q6NS82 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.46■□□□□ 0.87
Retreg2Q6NS82 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.46■□□□□ 0.87
Retreg2Q6NS82 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.45■□□□□ 0.86
Retreg2Q6NS82 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retreg2Q6NS82 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retreg2Q6NS82 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retreg2Q6NS82 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retreg2Q6NS82 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Retreg2Q6NS82 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retreg2Q6NS82 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retreg2Q6NS82 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Retreg2Q6NS82 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.44■□□□□ 0.86
Retreg2Q6NS82 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg2Q6NS82 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg2Q6NS82 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg2Q6NS82 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg2Q6NS82 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Retreg2Q6NS82 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg2Q6NS82 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg2Q6NS82 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg2Q6NS82 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg2Q6NS82 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg2Q6NS82 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retreg2Q6NS82 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Retreg2Q6NS82 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Retreg2Q6NS82 Gm27405-201ENSMUST00000184201 112 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms