Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim21Q62191 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Trim21Q62191 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim21Q62191 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim21Q62191 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim21Q62191 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim21Q62191 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim21Q62191 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim21Q62191 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.1■□□□□ 0.81
Trim21Q62191 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.1■□□□□ 0.81
Trim21Q62191 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim21Q62191 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim21Q62191 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim21Q62191 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.1■□□□□ 0.81
Trim21Q62191 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim21Q62191 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.09■□□□□ 0.81
Trim21Q62191 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
Trim21Q62191 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim21Q62191 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim21Q62191 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim21Q62191 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim21Q62191 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim21Q62191 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim21Q62191 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim21Q62191 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim21Q62191 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim21Q62191 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.09■□□□□ 0.81
Trim21Q62191 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.09■□□□□ 0.81
Trim21Q62191 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim21Q62191 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Trim21Q62191 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim21Q62191 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim21Q62191 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Trim21Q62191 Gm13241-201ENSMUST00000094493 780 ntBASIC20.08■□□□□ 0.81
Trim21Q62191 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim21Q62191 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim21Q62191 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim21Q62191 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.08■□□□□ 0.8
Trim21Q62191 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim21Q62191 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Trim21Q62191 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim21Q62191 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim21Q62191 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim21Q62191 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim21Q62191 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim21Q62191 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim21Q62191 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim21Q62191 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim21Q62191 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.07■□□□□ 0.8
Trim21Q62191 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim21Q62191 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim21Q62191 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim21Q62191 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim21Q62191 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.07■□□□□ 0.8
Trim21Q62191 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Trim21Q62191 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim21Q62191 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.07■□□□□ 0.8
Trim21Q62191 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim21Q62191 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
Trim21Q62191 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim21Q62191 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.06■□□□□ 0.8
Trim21Q62191 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim21Q62191 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim21Q62191 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim21Q62191 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim21Q62191 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim21Q62191 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim21Q62191 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim21Q62191 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim21Q62191 Gm21956-201ENSMUST00000179946 522 ntBASIC20.05■□□□□ 0.8
Trim21Q62191 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.05■□□□□ 0.8
Trim21Q62191 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim21Q62191 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Trim21Q62191 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim21Q62191 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trim21Q62191 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim21Q62191 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Trim21Q62191 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim21Q62191 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim21Q62191 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.04■□□□□ 0.8
Trim21Q62191 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim21Q62191 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.04■□□□□ 0.8
Trim21Q62191 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.04■□□□□ 0.8
Trim21Q62191 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.04■□□□□ 0.8
Trim21Q62191 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim21Q62191 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim21Q62191 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Trim21Q62191 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim21Q62191 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim21Q62191 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim21Q62191 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim21Q62191 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim21Q62191 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Trim21Q62191 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trim21Q62191 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim21Q62191 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim21Q62191 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.03■□□□□ 0.8
Trim21Q62191 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
Trim21Q62191 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim21Q62191 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms