Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Notch3Q61982 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Notch3Q61982 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Notch3Q61982 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Notch3Q61982 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Notch3Q61982 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Notch3Q61982 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Notch3Q61982 Mir5133-201ENSMUST00000174955 77 ntBASIC14.59□□□□□ -0.07
Notch3Q61982 Mir7071-201ENSMUST00000184847 69 ntBASIC14.59□□□□□ -0.07
Notch3Q61982 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Notch3Q61982 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Notch3Q61982 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Notch3Q61982 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Notch3Q61982 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Notch3Q61982 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.58□□□□□ -0.07
Notch3Q61982 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.58□□□□□ -0.08
Notch3Q61982 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Notch3Q61982 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Notch3Q61982 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.58□□□□□ -0.08
Notch3Q61982 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.58□□□□□ -0.08
Notch3Q61982 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Notch3Q61982 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Notch3Q61982 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Notch3Q61982 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Notch3Q61982 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Notch3Q61982 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.58□□□□□ -0.08
Notch3Q61982 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.58□□□□□ -0.08
Notch3Q61982 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
Notch3Q61982 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.58□□□□□ -0.08
Notch3Q61982 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Notch3Q61982 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Notch3Q61982 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Notch3Q61982 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Notch3Q61982 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Notch3Q61982 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Notch3Q61982 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Notch3Q61982 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Notch3Q61982 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Notch3Q61982 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Notch3Q61982 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Notch3Q61982 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Notch3Q61982 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Notch3Q61982 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Notch3Q61982 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.57□□□□□ -0.08
Notch3Q61982 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Notch3Q61982 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Notch3Q61982 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Notch3Q61982 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Notch3Q61982 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Notch3Q61982 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.57□□□□□ -0.08
Notch3Q61982 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.57□□□□□ -0.08
Notch3Q61982 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.56□□□□□ -0.08
Notch3Q61982 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Notch3Q61982 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Notch3Q61982 Gm7290-201ENSMUST00000104990 617 ntBASIC14.56□□□□□ -0.08
Notch3Q61982 Gm12918-201ENSMUST00000120234 636 ntBASIC14.56□□□□□ -0.08
Notch3Q61982 Gm15710-201ENSMUST00000121821 636 ntBASIC14.56□□□□□ -0.08
Notch3Q61982 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.56□□□□□ -0.08
Notch3Q61982 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Notch3Q61982 Mir6236-201ENSMUST00000184437 123 ntBASIC14.56□□□□□ -0.08
Notch3Q61982 Gm5075-201ENSMUST00000196916 622 ntBASIC14.56□□□□□ -0.08
Notch3Q61982 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.56□□□□□ -0.08
Notch3Q61982 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Notch3Q61982 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.56□□□□□ -0.08
Notch3Q61982 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.56□□□□□ -0.08
Notch3Q61982 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Notch3Q61982 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Notch3Q61982 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Notch3Q61982 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Notch3Q61982 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Notch3Q61982 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Notch3Q61982 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.55□□□□□ -0.08
Notch3Q61982 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Notch3Q61982 Gm13146-201ENSMUST00000118508 780 ntBASIC14.55□□□□□ -0.08
Notch3Q61982 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Notch3Q61982 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Notch3Q61982 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Notch3Q61982 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Notch3Q61982 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Notch3Q61982 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Notch3Q61982 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Notch3Q61982 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.55□□□□□ -0.08
Notch3Q61982 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Notch3Q61982 Gm10252-201ENSMUST00000209541 832 ntBASIC14.55□□□□□ -0.08
Notch3Q61982 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Notch3Q61982 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.55□□□□□ -0.08
Notch3Q61982 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.55□□□□□ -0.08
Notch3Q61982 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Notch3Q61982 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Notch3Q61982 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Notch3Q61982 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Notch3Q61982 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Notch3Q61982 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Notch3Q61982 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Notch3Q61982 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Notch3Q61982 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.54□□□□□ -0.08
Notch3Q61982 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Notch3Q61982 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Notch3Q61982 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Notch3Q61982 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms