Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ptch1Q61115 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ptch1Q61115 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Ptch1Q61115 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ptch1Q61115 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Ptch1Q61115 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ptch1Q61115 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
Ptch1Q61115 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ptch1Q61115 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ptch1Q61115 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ptch1Q61115 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ptch1Q61115 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ptch1Q61115 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Ptch1Q61115 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ptch1Q61115 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC28.05■■■□□ 2.08
Ptch1Q61115 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC28.05■■■□□ 2.08
Ptch1Q61115 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Ptch1Q61115 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Ptch1Q61115 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Ptch1Q61115 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
Ptch1Q61115 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC28.04■■■□□ 2.08
Ptch1Q61115 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
Ptch1Q61115 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
Ptch1Q61115 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Ptch1Q61115 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
Ptch1Q61115 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
Ptch1Q61115 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Ptch1Q61115 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Ptch1Q61115 H2-K2-201ENSMUST00000174250 1049 ntBASIC28.03■■■□□ 2.08
Ptch1Q61115 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC28.03■■■□□ 2.08
Ptch1Q61115 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Ptch1Q61115 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC28.03■■■□□ 2.08
Ptch1Q61115 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC28.02■■■□□ 2.08
Ptch1Q61115 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ptch1Q61115 Gm26766-202ENSMUST00000227544 2347 ntBASIC28.02■■■□□ 2.08
Ptch1Q61115 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ptch1Q61115 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ptch1Q61115 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Ptch1Q61115 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ptch1Q61115 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC28.01■■■□□ 2.08
Ptch1Q61115 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC28.01■■■□□ 2.08
Ptch1Q61115 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC28.01■■■□□ 2.08
Ptch1Q61115 Gm6433-201ENSMUST00000118634 875 ntBASIC28.01■■■□□ 2.08
Ptch1Q61115 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC28.01■■■□□ 2.08
Ptch1Q61115 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC28.01■■■□□ 2.08
Ptch1Q61115 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC28.01■■■□□ 2.08
Ptch1Q61115 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.08
Ptch1Q61115 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC28.01■■■□□ 2.07
Ptch1Q61115 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
Ptch1Q61115 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ptch1Q61115 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ptch1Q61115 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ptch1Q61115 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ptch1Q61115 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Ptch1Q61115 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Ptch1Q61115 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
Ptch1Q61115 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Ptch1Q61115 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
Ptch1Q61115 Gm13158-201ENSMUST00000122007 736 ntBASIC28■■■□□ 2.07
Ptch1Q61115 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC28■■■□□ 2.07
Ptch1Q61115 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC28■■■□□ 2.07
Ptch1Q61115 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC28■■■□□ 2.07
Ptch1Q61115 Gm43672-201ENSMUST00000199072 1731 ntBASIC27.99■■■□□ 2.07
Ptch1Q61115 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ptch1Q61115 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
Ptch1Q61115 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
Ptch1Q61115 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ptch1Q61115 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Ptch1Q61115 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Ptch1Q61115 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC27.98■■■□□ 2.07
Ptch1Q61115 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC27.98■■■□□ 2.07
Ptch1Q61115 AC175538.1-201ENSMUST00000225343 1269 ntBASIC27.98■■■□□ 2.07
Ptch1Q61115 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Ptch1Q61115 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Ptch1Q61115 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Ptch1Q61115 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC27.98■■■□□ 2.07
Ptch1Q61115 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Ptch1Q61115 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Ptch1Q61115 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Ptch1Q61115 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Ptch1Q61115 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Ptch1Q61115 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Ptch1Q61115 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Ptch1Q61115 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ptch1Q61115 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC27.96■■■□□ 2.07
Ptch1Q61115 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ptch1Q61115 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ptch1Q61115 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ptch1Q61115 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ptch1Q61115 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.07
Ptch1Q61115 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC27.95■■■□□ 2.07
Ptch1Q61115 Gm5417-201ENSMUST00000079706 384 ntBASIC27.95■■■□□ 2.07
Ptch1Q61115 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Ptch1Q61115 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Ptch1Q61115 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC27.95■■■□□ 2.06
Ptch1Q61115 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
Ptch1Q61115 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ptch1Q61115 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ptch1Q61115 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ptch1Q61115 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms