Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nr1h4Q60641 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nr1h4Q60641 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nr1h4Q60641 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.2■□□□□ 0.5
Nr1h4Q60641 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nr1h4Q60641 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nr1h4Q60641 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nr1h4Q60641 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1h4Q60641 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Nr1h4Q60641 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1h4Q60641 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1h4Q60641 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.19■□□□□ 0.5
Nr1h4Q60641 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.19■□□□□ 0.5
Nr1h4Q60641 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1h4Q60641 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1h4Q60641 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1h4Q60641 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1h4Q60641 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1h4Q60641 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Nr1h4Q60641 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.19■□□□□ 0.5
Nr1h4Q60641 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1h4Q60641 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1h4Q60641 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.18■□□□□ 0.5
Nr1h4Q60641 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h4Q60641 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.18■□□□□ 0.5
Nr1h4Q60641 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h4Q60641 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h4Q60641 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h4Q60641 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h4Q60641 Gm5812-201ENSMUST00000061073 957 ntBASIC18.18■□□□□ 0.5
Nr1h4Q60641 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Nr1h4Q60641 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h4Q60641 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h4Q60641 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Nr1h4Q60641 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h4Q60641 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1h4Q60641 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h4Q60641 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Nr1h4Q60641 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h4Q60641 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.17■□□□□ 0.5
Nr1h4Q60641 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h4Q60641 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h4Q60641 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.17■□□□□ 0.5
Nr1h4Q60641 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h4Q60641 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h4Q60641 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h4Q60641 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h4Q60641 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h4Q60641 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h4Q60641 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h4Q60641 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1h4Q60641 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1h4Q60641 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1h4Q60641 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nr1h4Q60641 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Nr1h4Q60641 Gm22238-201ENSMUST00000175222 88 ntBASIC18.16■□□□□ 0.5
Nr1h4Q60641 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.16■□□□□ 0.5
Nr1h4Q60641 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Nr1h4Q60641 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1h4Q60641 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1h4Q60641 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h4Q60641 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h4Q60641 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h4Q60641 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h4Q60641 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h4Q60641 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nr1h4Q60641 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.15■□□□□ 0.5
Nr1h4Q60641 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.15■□□□□ 0.5
Nr1h4Q60641 Gm15546-201ENSMUST00000122095 826 ntBASIC18.15■□□□□ 0.5
Nr1h4Q60641 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.15■□□□□ 0.5
Nr1h4Q60641 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.15■□□□□ 0.5
Nr1h4Q60641 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h4Q60641 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h4Q60641 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h4Q60641 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h4Q60641 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nr1h4Q60641 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nr1h4Q60641 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h4Q60641 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h4Q60641 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h4Q60641 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Nr1h4Q60641 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h4Q60641 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nr1h4Q60641 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h4Q60641 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h4Q60641 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nr1h4Q60641 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nr1h4Q60641 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nr1h4Q60641 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h4Q60641 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h4Q60641 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h4Q60641 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Nr1h4Q60641 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Nr1h4Q60641 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h4Q60641 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h4Q60641 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h4Q60641 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h4Q60641 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nr1h4Q60641 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1h4Q60641 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms