Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7-2Q5R1I3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7-2Q5R1I3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7-2Q5R1I3 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.17□□□□□ -0.14
Trav7-2Q5R1I3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav7-2Q5R1I3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Golph3-205ENSMUST00000228671 2842 ntBASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav7-2Q5R1I3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav7-2Q5R1I3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav7-2Q5R1I3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav7-2Q5R1I3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7-2Q5R1I3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7-2Q5R1I3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7-2Q5R1I3 Gm12821-201ENSMUST00000120022 600 ntBASIC14.14□□□□□ -0.15
Trav7-2Q5R1I3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7-2Q5R1I3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav7-2Q5R1I3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7-2Q5R1I3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7-2Q5R1I3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7-2Q5R1I3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav7-2Q5R1I3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7-2Q5R1I3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav7-2Q5R1I3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7-2Q5R1I3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7-2Q5R1I3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7-2Q5R1I3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7-2Q5R1I3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7-2Q5R1I3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7-2Q5R1I3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7-2Q5R1I3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7-2Q5R1I3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trav7-2Q5R1I3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7-2Q5R1I3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7-2Q5R1I3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7-2Q5R1I3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7-2Q5R1I3 Gm21956-201ENSMUST00000179946 522 ntBASIC14.12□□□□□ -0.15
Trav7-2Q5R1I3 Gm43137-201ENSMUST00000198052 594 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms