Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7d-3Q5R1I1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-3Q5R1I1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav7d-3Q5R1I1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-3Q5R1I1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-3Q5R1I1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Trav7d-3Q5R1I1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Trav7d-3Q5R1I1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav7d-3Q5R1I1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-3Q5R1I1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav7d-3Q5R1I1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav7d-3Q5R1I1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-3Q5R1I1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-3Q5R1I1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-3Q5R1I1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-3Q5R1I1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav7d-3Q5R1I1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-3Q5R1I1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-3Q5R1I1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-3Q5R1I1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-3Q5R1I1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-3Q5R1I1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-3Q5R1I1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-3Q5R1I1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-3Q5R1I1 AC154266.1-201ENSMUST00000223190 503 ntBASIC14□□□□□ -0.17
Trav7d-3Q5R1I1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-3Q5R1I1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-3Q5R1I1 Hsf1-204ENSMUST00000226872 2104 ntBASIC14□□□□□ -0.17
Trav7d-3Q5R1I1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-3Q5R1I1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-3Q5R1I1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-3Q5R1I1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-3Q5R1I1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav7d-3Q5R1I1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-3Q5R1I1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms