Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3-3Q5R1C3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav3-3Q5R1C3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3-3Q5R1C3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3-3Q5R1C3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3-3Q5R1C3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Trav3-3Q5R1C3 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.33□□□□□ -0.12
Trav3-3Q5R1C3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3-3Q5R1C3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-3Q5R1C3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-3Q5R1C3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-3Q5R1C3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-3Q5R1C3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-3Q5R1C3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-3Q5R1C3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-3Q5R1C3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-3Q5R1C3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-3Q5R1C3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav3-3Q5R1C3 Gm7332-201ENSMUST00000118351 454 ntBASIC14.31□□□□□ -0.12
Trav3-3Q5R1C3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-3Q5R1C3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3-3Q5R1C3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-3Q5R1C3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-3Q5R1C3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3-3Q5R1C3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav3-3Q5R1C3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav3-3Q5R1C3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3-3Q5R1C3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3-3Q5R1C3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3-3Q5R1C3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3-3Q5R1C3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3-3Q5R1C3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3-3Q5R1C3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Trav3-3Q5R1C3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3-3Q5R1C3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3-3Q5R1C3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav3-3Q5R1C3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav3-3Q5R1C3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav3-3Q5R1C3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav3-3Q5R1C3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.27□□□□□ -0.12
Trav3-3Q5R1C3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav3-3Q5R1C3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3-3Q5R1C3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3-3Q5R1C3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3-3Q5R1C3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3-3Q5R1C3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms