Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Srrm1Q52KI8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.51■■□□□ 1.03
Srrm1Q52KI8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Srrm1Q52KI8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Srrm1Q52KI8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Srrm1Q52KI8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Srrm1Q52KI8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Srrm1Q52KI8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Srrm1Q52KI8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Srrm1Q52KI8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Srrm1Q52KI8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Srrm1Q52KI8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Srrm1Q52KI8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Srrm1Q52KI8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Srrm1Q52KI8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.5■■□□□ 1.03
Srrm1Q52KI8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Srrm1Q52KI8 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.49■■□□□ 1.03
Srrm1Q52KI8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Srrm1Q52KI8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
Srrm1Q52KI8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Srrm1Q52KI8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Srrm1Q52KI8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Srrm1Q52KI8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.48■■□□□ 1.03
Srrm1Q52KI8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.48■■□□□ 1.03
Srrm1Q52KI8 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.48■■□□□ 1.03
Srrm1Q52KI8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Srrm1Q52KI8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Srrm1Q52KI8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Srrm1Q52KI8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Srrm1Q52KI8 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.47■■□□□ 1.03
Srrm1Q52KI8 AA386476-201ENSMUST00000098781 1665 ntBASIC21.47■■□□□ 1.03
Srrm1Q52KI8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Srrm1Q52KI8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Srrm1Q52KI8 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.47■■□□□ 1.03
Srrm1Q52KI8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Srrm1Q52KI8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Srrm1Q52KI8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.47■■□□□ 1.03
Srrm1Q52KI8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Gm5643-201ENSMUST00000117081 966 ntBASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Srrm1Q52KI8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Srrm1Q52KI8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Srrm1Q52KI8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Srrm1Q52KI8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.45■■□□□ 1.02
Srrm1Q52KI8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Srrm1Q52KI8 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.45■■□□□ 1.02
Srrm1Q52KI8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Srrm1Q52KI8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.45■■□□□ 1.02
Srrm1Q52KI8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Srrm1Q52KI8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.44■■□□□ 1.02
Srrm1Q52KI8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.44■■□□□ 1.02
Srrm1Q52KI8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Srrm1Q52KI8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
Srrm1Q52KI8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.44■■□□□ 1.02
Srrm1Q52KI8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Srrm1Q52KI8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Srrm1Q52KI8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Srrm1Q52KI8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Srrm1Q52KI8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.43■■□□□ 1.02
Srrm1Q52KI8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Srrm1Q52KI8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Srrm1Q52KI8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Srrm1Q52KI8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.43■■□□□ 1.02
Srrm1Q52KI8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Srrm1Q52KI8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
Srrm1Q52KI8 Gm6576-201ENSMUST00000169678 883 ntBASIC21.43■■□□□ 1.02
Srrm1Q52KI8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Srrm1Q52KI8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Srrm1Q52KI8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Srrm1Q52KI8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Srrm1Q52KI8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Srrm1Q52KI8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Srrm1Q52KI8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Srrm1Q52KI8 Gm7860-201ENSMUST00000121190 879 ntBASIC21.42■■□□□ 1.02
Srrm1Q52KI8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.42■■□□□ 1.02
Srrm1Q52KI8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Srrm1Q52KI8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.42■■□□□ 1.02
Srrm1Q52KI8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Srrm1Q52KI8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Srrm1Q52KI8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
Srrm1Q52KI8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Srrm1Q52KI8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Srrm1Q52KI8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Srrm1Q52KI8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Srrm1Q52KI8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms