Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.18■■□□□ 1.14
Rc3h1Q4VGL6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rc3h1Q4VGL6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rc3h1Q4VGL6 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rc3h1Q4VGL6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Rc3h1Q4VGL6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rc3h1Q4VGL6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.18■■□□□ 1.14
Rc3h1Q4VGL6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC22.18■■□□□ 1.14
Rc3h1Q4VGL6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rc3h1Q4VGL6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rc3h1Q4VGL6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rc3h1Q4VGL6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rc3h1Q4VGL6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rc3h1Q4VGL6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rc3h1Q4VGL6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rc3h1Q4VGL6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rc3h1Q4VGL6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Rc3h1Q4VGL6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rc3h1Q4VGL6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rc3h1Q4VGL6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rc3h1Q4VGL6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rc3h1Q4VGL6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rc3h1Q4VGL6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rc3h1Q4VGL6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.17■■□□□ 1.14
Rc3h1Q4VGL6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rc3h1Q4VGL6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rc3h1Q4VGL6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Rc3h1Q4VGL6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rc3h1Q4VGL6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rc3h1Q4VGL6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Rc3h1Q4VGL6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rc3h1Q4VGL6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rc3h1Q4VGL6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rc3h1Q4VGL6 Gm6365-201ENSMUST00000054711 744 ntBASIC22.16■■□□□ 1.14
Rc3h1Q4VGL6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rc3h1Q4VGL6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rc3h1Q4VGL6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rc3h1Q4VGL6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC22.16■■□□□ 1.14
Rc3h1Q4VGL6 Iqck-206ENSMUST00000208658 2891 ntBASIC22.16■■□□□ 1.14
Rc3h1Q4VGL6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rc3h1Q4VGL6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rc3h1Q4VGL6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rc3h1Q4VGL6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rc3h1Q4VGL6 Gm13148-201ENSMUST00000118892 745 ntBASIC22.15■■□□□ 1.14
Rc3h1Q4VGL6 Mir5133-201ENSMUST00000174955 77 ntBASIC22.15■■□□□ 1.14
Rc3h1Q4VGL6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC22.15■■□□□ 1.14
Rc3h1Q4VGL6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rc3h1Q4VGL6 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.15■■□□□ 1.14
Rc3h1Q4VGL6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Rc3h1Q4VGL6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.15■■□□□ 1.14
Rc3h1Q4VGL6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rc3h1Q4VGL6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rc3h1Q4VGL6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Rc3h1Q4VGL6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rc3h1Q4VGL6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rc3h1Q4VGL6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rc3h1Q4VGL6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rc3h1Q4VGL6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC22.14■■□□□ 1.13
Rc3h1Q4VGL6 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.14■■□□□ 1.13
Rc3h1Q4VGL6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rc3h1Q4VGL6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rc3h1Q4VGL6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rc3h1Q4VGL6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rc3h1Q4VGL6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rc3h1Q4VGL6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rc3h1Q4VGL6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.13■■□□□ 1.13
Rc3h1Q4VGL6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rc3h1Q4VGL6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rc3h1Q4VGL6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rc3h1Q4VGL6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rc3h1Q4VGL6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rc3h1Q4VGL6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rc3h1Q4VGL6 Gm27011-201ENSMUST00000182352 972 ntBASIC22.12■■□□□ 1.13
Rc3h1Q4VGL6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.12■■□□□ 1.13
Rc3h1Q4VGL6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rc3h1Q4VGL6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Rc3h1Q4VGL6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rc3h1Q4VGL6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rc3h1Q4VGL6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rc3h1Q4VGL6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Rc3h1Q4VGL6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rc3h1Q4VGL6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC22.11■■□□□ 1.13
Rc3h1Q4VGL6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rc3h1Q4VGL6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Rc3h1Q4VGL6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Rc3h1Q4VGL6 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.11■■□□□ 1.13
Rc3h1Q4VGL6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rc3h1Q4VGL6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Rc3h1Q4VGL6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Rc3h1Q4VGL6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rc3h1Q4VGL6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rc3h1Q4VGL6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rc3h1Q4VGL6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rc3h1Q4VGL6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rc3h1Q4VGL6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rc3h1Q4VGL6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Rc3h1Q4VGL6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rc3h1Q4VGL6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rc3h1Q4VGL6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC22.09■■□□□ 1.13
Rc3h1Q4VGL6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms