Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Herc2Q4U2R1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Herc2Q4U2R1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Herc2Q4U2R1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Herc2Q4U2R1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Herc2Q4U2R1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Herc2Q4U2R1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Herc2Q4U2R1 Gm17661-201ENSMUST00000170317 270 ntBASIC11.63□□□□□ -0.55
Herc2Q4U2R1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Herc2Q4U2R1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Herc2Q4U2R1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC11.63□□□□□ -0.55
Herc2Q4U2R1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Mir6236-201ENSMUST00000184437 123 ntBASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Gm7153-201ENSMUST00000117092 455 ntBASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Herc2Q4U2R1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.61□□□□□ -0.55
Herc2Q4U2R1 AW822252-206ENSMUST00000208904 237 ntBASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Gm42911-201ENSMUST00000199360 1630 ntBASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Herc2Q4U2R1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Herc2Q4U2R1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.6□□□□□ -0.55
Herc2Q4U2R1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.6□□□□□ -0.55
Herc2Q4U2R1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Herc2Q4U2R1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Herc2Q4U2R1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Herc2Q4U2R1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Herc2Q4U2R1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Herc2Q4U2R1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Herc2Q4U2R1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Herc2Q4U2R1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Herc2Q4U2R1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Herc2Q4U2R1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Herc2Q4U2R1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Herc2Q4U2R1 Gm6443-201ENSMUST00000203599 874 ntBASIC11.59□□□□□ -0.55
Herc2Q4U2R1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Herc2Q4U2R1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Herc2Q4U2R1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Herc2Q4U2R1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Herc2Q4U2R1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Herc2Q4U2R1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.59□□□□□ -0.55
Herc2Q4U2R1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Herc2Q4U2R1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.59□□□□□ -0.55
Herc2Q4U2R1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Herc2Q4U2R1 Gm18669-201ENSMUST00000216049 778 ntBASIC11.59□□□□□ -0.55
Herc2Q4U2R1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC11.59□□□□□ -0.55
Herc2Q4U2R1 Odf3b-204ENSMUST00000227834 930 ntBASIC11.59□□□□□ -0.55
Herc2Q4U2R1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.58□□□□□ -0.55
Herc2Q4U2R1 Gm18959-201ENSMUST00000208954 655 ntBASIC11.58□□□□□ -0.55
Herc2Q4U2R1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Herc2Q4U2R1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Herc2Q4U2R1 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.58□□□□□ -0.56
Herc2Q4U2R1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Herc2Q4U2R1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Herc2Q4U2R1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Herc2Q4U2R1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Herc2Q4U2R1 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.58□□□□□ -0.56
Herc2Q4U2R1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Herc2Q4U2R1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Herc2Q4U2R1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Herc2Q4U2R1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Herc2Q4U2R1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Herc2Q4U2R1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Herc2Q4U2R1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Herc2Q4U2R1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Herc2Q4U2R1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Herc2Q4U2R1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms