Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syne3Q4FZC9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.25■□□□□ 0.83
Syne3Q4FZC9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Syne3Q4FZC9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Syne3Q4FZC9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.25■□□□□ 0.83
Syne3Q4FZC9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Syne3Q4FZC9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Syne3Q4FZC9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.24■□□□□ 0.83
Syne3Q4FZC9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Syne3Q4FZC9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Syne3Q4FZC9 AA386476-201ENSMUST00000098781 1665 ntBASIC20.24■□□□□ 0.83
Syne3Q4FZC9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.24■□□□□ 0.83
Syne3Q4FZC9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.24■□□□□ 0.83
Syne3Q4FZC9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syne3Q4FZC9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syne3Q4FZC9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syne3Q4FZC9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Syne3Q4FZC9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Syne3Q4FZC9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Syne3Q4FZC9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syne3Q4FZC9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syne3Q4FZC9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.22■□□□□ 0.83
Syne3Q4FZC9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syne3Q4FZC9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Syne3Q4FZC9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syne3Q4FZC9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syne3Q4FZC9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Syne3Q4FZC9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syne3Q4FZC9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Syne3Q4FZC9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Syne3Q4FZC9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syne3Q4FZC9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syne3Q4FZC9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Syne3Q4FZC9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syne3Q4FZC9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
Syne3Q4FZC9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syne3Q4FZC9 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.21■□□□□ 0.83
Syne3Q4FZC9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Syne3Q4FZC9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.21■□□□□ 0.83
Syne3Q4FZC9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Syne3Q4FZC9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syne3Q4FZC9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syne3Q4FZC9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Syne3Q4FZC9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Syne3Q4FZC9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.2■□□□□ 0.82
Syne3Q4FZC9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Syne3Q4FZC9 Gm43060-201ENSMUST00000200621 289 ntBASIC20.2■□□□□ 0.82
Syne3Q4FZC9 Gm40848-201ENSMUST00000221998 324 ntBASIC20.2■□□□□ 0.82
Syne3Q4FZC9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syne3Q4FZC9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syne3Q4FZC9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syne3Q4FZC9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syne3Q4FZC9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Syne3Q4FZC9 Golph3-205ENSMUST00000228671 2842 ntBASIC20.2■□□□□ 0.82
Syne3Q4FZC9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Syne3Q4FZC9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syne3Q4FZC9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Syne3Q4FZC9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syne3Q4FZC9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syne3Q4FZC9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Syne3Q4FZC9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syne3Q4FZC9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syne3Q4FZC9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syne3Q4FZC9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Syne3Q4FZC9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Syne3Q4FZC9 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.19■□□□□ 0.82
Syne3Q4FZC9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Syne3Q4FZC9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syne3Q4FZC9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Syne3Q4FZC9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Syne3Q4FZC9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Syne3Q4FZC9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Syne3Q4FZC9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Syne3Q4FZC9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Syne3Q4FZC9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Syne3Q4FZC9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Syne3Q4FZC9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Syne3Q4FZC9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Syne3Q4FZC9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Syne3Q4FZC9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Syne3Q4FZC9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms