Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Arhgef40Q3UPH7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC28.56■■■□□ 2.16
Arhgef40Q3UPH7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Arhgef40Q3UPH7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
Arhgef40Q3UPH7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC28.56■■■□□ 2.16
Arhgef40Q3UPH7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Arhgef40Q3UPH7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Arhgef40Q3UPH7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Arhgef40Q3UPH7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Arhgef40Q3UPH7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Arhgef40Q3UPH7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Arhgef40Q3UPH7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC28.53■■■□□ 2.16
Arhgef40Q3UPH7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC28.53■■■□□ 2.16
Arhgef40Q3UPH7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Arhgef40Q3UPH7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Arhgef40Q3UPH7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
Arhgef40Q3UPH7 Gm12896-201ENSMUST00000118430 226 ntBASIC28.53■■■□□ 2.16
Arhgef40Q3UPH7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Arhgef40Q3UPH7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Arhgef40Q3UPH7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
Arhgef40Q3UPH7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Arhgef40Q3UPH7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Arhgef40Q3UPH7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Arhgef40Q3UPH7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC28.52■■■□□ 2.16
Arhgef40Q3UPH7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Arhgef40Q3UPH7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
Arhgef40Q3UPH7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Arhgef40Q3UPH7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
Arhgef40Q3UPH7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Arhgef40Q3UPH7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC28.52■■■□□ 2.16
Arhgef40Q3UPH7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Arhgef40Q3UPH7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Arhgef40Q3UPH7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Arhgef40Q3UPH7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
Arhgef40Q3UPH7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Arhgef40Q3UPH7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Arhgef40Q3UPH7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC28.51■■■□□ 2.15
Arhgef40Q3UPH7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
Arhgef40Q3UPH7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Arhgef40Q3UPH7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
Arhgef40Q3UPH7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Arhgef40Q3UPH7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC28.5■■■□□ 2.15
Arhgef40Q3UPH7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC28.5■■■□□ 2.15
Arhgef40Q3UPH7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC28.5■■■□□ 2.15
Arhgef40Q3UPH7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Arhgef40Q3UPH7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Arhgef40Q3UPH7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC28.49■■■□□ 2.15
Arhgef40Q3UPH7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Arhgef40Q3UPH7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Arhgef40Q3UPH7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
Arhgef40Q3UPH7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Arhgef40Q3UPH7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC28.48■■■□□ 2.15
Arhgef40Q3UPH7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC28.48■■■□□ 2.15
Arhgef40Q3UPH7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Arhgef40Q3UPH7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Arhgef40Q3UPH7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Arhgef40Q3UPH7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Arhgef40Q3UPH7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Arhgef40Q3UPH7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC28.47■■■□□ 2.15
Arhgef40Q3UPH7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC28.47■■■□□ 2.15
Arhgef40Q3UPH7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
Arhgef40Q3UPH7 Gm29994-201ENSMUST00000195495 1193 ntBASIC28.47■■■□□ 2.15
Arhgef40Q3UPH7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC28.47■■■□□ 2.15
Arhgef40Q3UPH7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Arhgef40Q3UPH7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Arhgef40Q3UPH7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Arhgef40Q3UPH7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Arhgef40Q3UPH7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Arhgef40Q3UPH7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Arhgef40Q3UPH7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Arhgef40Q3UPH7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Arhgef40Q3UPH7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Arhgef40Q3UPH7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Arhgef40Q3UPH7 Dio3-201ENSMUST00000097228 1449 ntBASIC28.45■■■□□ 2.14
Arhgef40Q3UPH7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC28.45■■■□□ 2.14
Arhgef40Q3UPH7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Arhgef40Q3UPH7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Arhgef40Q3UPH7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Arhgef40Q3UPH7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
Arhgef40Q3UPH7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Arhgef40Q3UPH7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Arhgef40Q3UPH7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Arhgef40Q3UPH7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Arhgef40Q3UPH7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC28.43■■■□□ 2.14
Arhgef40Q3UPH7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC28.43■■■□□ 2.14
Arhgef40Q3UPH7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC28.43■■■□□ 2.14
Arhgef40Q3UPH7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Arhgef40Q3UPH7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Arhgef40Q3UPH7 Gm43006-201ENSMUST00000197702 1602 ntBASIC28.43■■■□□ 2.14
Arhgef40Q3UPH7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Arhgef40Q3UPH7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC28.43■■■□□ 2.14
Arhgef40Q3UPH7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC28.43■■■□□ 2.14
Arhgef40Q3UPH7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Arhgef40Q3UPH7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Arhgef40Q3UPH7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
Arhgef40Q3UPH7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Arhgef40Q3UPH7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Arhgef40Q3UPH7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
Arhgef40Q3UPH7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC28.42■■■□□ 2.14
Arhgef40Q3UPH7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms