Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Treml4Q3LRV9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Treml4Q3LRV9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Treml4Q3LRV9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Treml4Q3LRV9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Treml4Q3LRV9 Gm13168-201ENSMUST00000121771 632 ntBASIC17.9■□□□□ 0.46
Treml4Q3LRV9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.9■□□□□ 0.46
Treml4Q3LRV9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Treml4Q3LRV9 Gm20049-201ENSMUST00000219950 730 ntBASIC17.9■□□□□ 0.46
Treml4Q3LRV9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Treml4Q3LRV9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Treml4Q3LRV9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Treml4Q3LRV9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Treml4Q3LRV9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Treml4Q3LRV9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Treml4Q3LRV9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Treml4Q3LRV9 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.89■□□□□ 0.45
Treml4Q3LRV9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Treml4Q3LRV9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Treml4Q3LRV9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Treml4Q3LRV9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.89■□□□□ 0.45
Treml4Q3LRV9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Treml4Q3LRV9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.89■□□□□ 0.45
Treml4Q3LRV9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Treml4Q3LRV9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Treml4Q3LRV9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.89■□□□□ 0.45
Treml4Q3LRV9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Treml4Q3LRV9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Treml4Q3LRV9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Treml4Q3LRV9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Treml4Q3LRV9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Treml4Q3LRV9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Treml4Q3LRV9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Treml4Q3LRV9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Treml4Q3LRV9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Treml4Q3LRV9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.88■□□□□ 0.45
Treml4Q3LRV9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.88■□□□□ 0.45
Treml4Q3LRV9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Treml4Q3LRV9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Treml4Q3LRV9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Treml4Q3LRV9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Treml4Q3LRV9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Treml4Q3LRV9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Treml4Q3LRV9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Treml4Q3LRV9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Treml4Q3LRV9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Treml4Q3LRV9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
Treml4Q3LRV9 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.87■□□□□ 0.45
Treml4Q3LRV9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Treml4Q3LRV9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Treml4Q3LRV9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Treml4Q3LRV9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Treml4Q3LRV9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.86■□□□□ 0.45
Treml4Q3LRV9 Gm6211-202ENSMUST00000167849 925 ntBASIC17.86■□□□□ 0.45
Treml4Q3LRV9 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.86■□□□□ 0.45
Treml4Q3LRV9 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.86■□□□□ 0.45
Treml4Q3LRV9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Treml4Q3LRV9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Treml4Q3LRV9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Treml4Q3LRV9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Treml4Q3LRV9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Treml4Q3LRV9 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.86■□□□□ 0.45
Treml4Q3LRV9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.86■□□□□ 0.45
Treml4Q3LRV9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Treml4Q3LRV9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Treml4Q3LRV9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Treml4Q3LRV9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Treml4Q3LRV9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Treml4Q3LRV9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Treml4Q3LRV9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Treml4Q3LRV9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Treml4Q3LRV9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Treml4Q3LRV9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Treml4Q3LRV9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Treml4Q3LRV9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Treml4Q3LRV9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Treml4Q3LRV9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.85■□□□□ 0.45
Treml4Q3LRV9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.85■□□□□ 0.45
Treml4Q3LRV9 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.85■□□□□ 0.45
Treml4Q3LRV9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Treml4Q3LRV9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Treml4Q3LRV9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Treml4Q3LRV9 Gm10812-201ENSMUST00000099864 546 ntBASIC17.85■□□□□ 0.45
Treml4Q3LRV9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Treml4Q3LRV9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Treml4Q3LRV9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Treml4Q3LRV9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Treml4Q3LRV9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Treml4Q3LRV9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Treml4Q3LRV9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Treml4Q3LRV9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Treml4Q3LRV9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Treml4Q3LRV9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.84■□□□□ 0.45
Treml4Q3LRV9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms