Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrfn1Q2WF71 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrfn1Q2WF71 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrfn1Q2WF71 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrfn1Q2WF71 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Lrfn1Q2WF71 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrfn1Q2WF71 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrfn1Q2WF71 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.56■□□□□ 0.4
Lrfn1Q2WF71 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrfn1Q2WF71 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrfn1Q2WF71 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrfn1Q2WF71 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrfn1Q2WF71 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrfn1Q2WF71 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrfn1Q2WF71 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Lrfn1Q2WF71 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrfn1Q2WF71 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrfn1Q2WF71 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrfn1Q2WF71 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrfn1Q2WF71 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrfn1Q2WF71 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lrfn1Q2WF71 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrfn1Q2WF71 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrfn1Q2WF71 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Lrfn1Q2WF71 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.55■□□□□ 0.4
Lrfn1Q2WF71 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lrfn1Q2WF71 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrfn1Q2WF71 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrfn1Q2WF71 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrfn1Q2WF71 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Lrfn1Q2WF71 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrfn1Q2WF71 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.53■□□□□ 0.4
Lrfn1Q2WF71 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrfn1Q2WF71 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.53■□□□□ 0.4
Lrfn1Q2WF71 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.53■□□□□ 0.4
Lrfn1Q2WF71 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrfn1Q2WF71 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrfn1Q2WF71 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
Lrfn1Q2WF71 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.53■□□□□ 0.4
Lrfn1Q2WF71 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lrfn1Q2WF71 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrfn1Q2WF71 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrfn1Q2WF71 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrfn1Q2WF71 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrfn1Q2WF71 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrfn1Q2WF71 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrfn1Q2WF71 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
Lrfn1Q2WF71 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
Lrfn1Q2WF71 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Lrfn1Q2WF71 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Lrfn1Q2WF71 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lrfn1Q2WF71 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lrfn1Q2WF71 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms