Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col19a1Q0VF58 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col19a1Q0VF58 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col19a1Q0VF58 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.64■□□□□ 0.89
Col19a1Q0VF58 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col19a1Q0VF58 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col19a1Q0VF58 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col19a1Q0VF58 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Col19a1Q0VF58 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.63■□□□□ 0.89
Col19a1Q0VF58 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Col19a1Q0VF58 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col19a1Q0VF58 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Gm13158-201ENSMUST00000122007 736 ntBASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col19a1Q0VF58 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col19a1Q0VF58 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Col19a1Q0VF58 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Col19a1Q0VF58 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.61■□□□□ 0.89
Col19a1Q0VF58 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col19a1Q0VF58 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.61■□□□□ 0.89
Col19a1Q0VF58 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col19a1Q0VF58 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.61■□□□□ 0.89
Col19a1Q0VF58 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col19a1Q0VF58 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.6■□□□□ 0.89
Col19a1Q0VF58 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col19a1Q0VF58 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col19a1Q0VF58 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col19a1Q0VF58 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col19a1Q0VF58 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col19a1Q0VF58 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.6■□□□□ 0.89
Col19a1Q0VF58 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.6■□□□□ 0.89
Col19a1Q0VF58 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.6■□□□□ 0.89
Col19a1Q0VF58 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.6■□□□□ 0.89
Col19a1Q0VF58 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col19a1Q0VF58 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col19a1Q0VF58 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col19a1Q0VF58 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col19a1Q0VF58 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col19a1Q0VF58 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col19a1Q0VF58 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col19a1Q0VF58 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Col19a1Q0VF58 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.59■□□□□ 0.89
Col19a1Q0VF58 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col19a1Q0VF58 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col19a1Q0VF58 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col19a1Q0VF58 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Col19a1Q0VF58 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.58■□□□□ 0.89
Col19a1Q0VF58 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.58■□□□□ 0.89
Col19a1Q0VF58 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col19a1Q0VF58 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col19a1Q0VF58 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Col19a1Q0VF58 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col19a1Q0VF58 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col19a1Q0VF58 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col19a1Q0VF58 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.57■□□□□ 0.88
Col19a1Q0VF58 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col19a1Q0VF58 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col19a1Q0VF58 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col19a1Q0VF58 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col19a1Q0VF58 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col19a1Q0VF58 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col19a1Q0VF58 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col19a1Q0VF58 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col19a1Q0VF58 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col19a1Q0VF58 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col19a1Q0VF58 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.56■□□□□ 0.88
Col19a1Q0VF58 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.56■□□□□ 0.88
Col19a1Q0VF58 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col19a1Q0VF58 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col19a1Q0VF58 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col19a1Q0VF58 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col19a1Q0VF58 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col19a1Q0VF58 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Col19a1Q0VF58 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col19a1Q0VF58 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col19a1Q0VF58 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.55■□□□□ 0.88
Col19a1Q0VF58 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col19a1Q0VF58 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col19a1Q0VF58 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Col19a1Q0VF58 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col19a1Q0VF58 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col19a1Q0VF58 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col19a1Q0VF58 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms