Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 PSF3YOL146W 585 nt3.49□□□□□ -1.85
CLP1Q08685 RPS23BYPR132W 438 nt3.49□□□□□ -1.85
CLP1Q08685 MIG1YGL035C 1515 nt3.49□□□□□ -1.85
CLP1Q08685 STP1YDR463W 1560 nt3.48□□□□□ -1.85
CLP1Q08685 TSC11YER093C 4293 nt3.48□□□□□ -1.85
CLP1Q08685 SPO77YLR341W 1434 nt3.48□□□□□ -1.85
CLP1Q08685 WBP1YEL002C 1293 nt3.48□□□□□ -1.85
CLP1Q08685 YER165C-AYER165C-A 357 nt3.48□□□□□ -1.85
CLP1Q08685 SEC53YFL045C 765 nt3.48□□□□□ -1.85
CLP1Q08685 YGL041W-AYGL041W-A 465 nt3.48□□□□□ -1.85
CLP1Q08685 YGL074CYGL074C 327 nt3.48□□□□□ -1.85
CLP1Q08685 MMS2YGL087C 414 nt3.48□□□□□ -1.85
CLP1Q08685 CLC1YGR167W 702 nt3.48□□□□□ -1.85
CLP1Q08685 ISA2YPR067W 558 nt3.48□□□□□ -1.85
CLP1Q08685 PHO81YGR233C 3537 nt3.48□□□□□ -1.85
CLP1Q08685 STP2YHR006W 1626 nt3.48□□□□□ -1.85
CLP1Q08685 PCL10YGL134W 1302 nt3.47□□□□□ -1.85
CLP1Q08685 DOA4YDR069C 2781 nt3.47□□□□□ -1.85
CLP1Q08685 YGR015CYGR015C 987 nt3.47□□□□□ -1.85
CLP1Q08685 MOH1YBL049W 417 nt3.47□□□□□ -1.85
CLP1Q08685 WRS1YOL097C 1299 nt3.47□□□□□ -1.85
CLP1Q08685 ARR1YPR199C 885 nt3.47□□□□□ -1.85
CLP1Q08685 SPB4YFL002C 1821 nt3.47□□□□□ -1.85
CLP1Q08685 CMK1YFR014C 1341 nt3.46□□□□□ -1.85
CLP1Q08685 MIF2YKL089W 1650 nt3.46□□□□□ -1.85
CLP1Q08685 VPS30YPL120W 1674 nt3.46□□□□□ -1.85
CLP1Q08685 YDR193WYDR193W 399 nt3.46□□□□□ -1.86
CLP1Q08685 FRQ1YDR373W 573 nt3.46□□□□□ -1.86
CLP1Q08685 RRP17YDR412W 708 nt3.46□□□□□ -1.86
CLP1Q08685 tK(UUU)DtK(UUU)D 73 nt3.46□□□□□ -1.86
CLP1Q08685 tK(UUU)G1tK(UUU)G1 73 nt3.46□□□□□ -1.86
CLP1Q08685 tK(UUU)G2tK(UUU)G2 73 nt3.46□□□□□ -1.86
CLP1Q08685 tK(UUU)KtK(UUU)K 73 nt3.46□□□□□ -1.86
CLP1Q08685 tK(UUU)LtK(UUU)L 73 nt3.46□□□□□ -1.86
CLP1Q08685 tK(UUU)OtK(UUU)O 73 nt3.46□□□□□ -1.86
CLP1Q08685 tK(UUU)PtK(UUU)P 73 nt3.46□□□□□ -1.86
CLP1Q08685 YGL214WYGL214W 486 nt3.46□□□□□ -1.86
CLP1Q08685 ARG2YJL071W 1725 nt3.46□□□□□ -1.86
CLP1Q08685 MGA1YGR249W 1371 nt3.46□□□□□ -1.86
CLP1Q08685 ULP1YPL020C 1866 nt3.45□□□□□ -1.86
CLP1Q08685 OSH3YHR073W 2991 nt3.45□□□□□ -1.86
CLP1Q08685 ATP25YMR098C 1839 nt3.45□□□□□ -1.86
CLP1Q08685 IMG2YCR071C 441 nt3.45□□□□□ -1.86
CLP1Q08685 YER147C-AYER147C-A 411 nt3.45□□□□□ -1.86
CLP1Q08685 COS8YHL048W 1146 nt3.45□□□□□ -1.86
CLP1Q08685 YAL064W-BYAL064W-B 381 nt3.45□□□□□ -1.86
CLP1Q08685 DCS1YLR270W 1053 nt3.45□□□□□ -1.86
CLP1Q08685 SIL1YOL031C 1266 nt3.45□□□□□ -1.86
CLP1Q08685 DSE3YOR264W 1293 nt3.45□□□□□ -1.86
CLP1Q08685 RKM4YDR257C 1485 nt3.45□□□□□ -1.86
CLP1Q08685 SMC3YJL074C 3693 nt3.44□□□□□ -1.86
CLP1Q08685 PRS5YOL061W 1491 nt3.44□□□□□ -1.86
CLP1Q08685 BUR2YLR226W 1188 nt3.44□□□□□ -1.86
CLP1Q08685 CDH1YGL003C 1701 nt3.44□□□□□ -1.86
CLP1Q08685 SPO71YDR104C 3738 nt3.44□□□□□ -1.86
CLP1Q08685 IME4YGL192W 1803 nt3.43□□□□□ -1.86
CLP1Q08685 YKR075CYKR075C 924 nt3.43□□□□□ -1.86
CLP1Q08685 YBL029WYBL029W 1131 nt3.43□□□□□ -1.86
CLP1Q08685 SNO1YMR095C 675 nt3.43□□□□□ -1.86
CLP1Q08685 YBR053CYBR053C 1077 nt3.43□□□□□ -1.86
CLP1Q08685 PRM2YIL037C 1971 nt3.43□□□□□ -1.86
CLP1Q08685 CUE3YGL110C 1875 nt3.43□□□□□ -1.86
CLP1Q08685 CLD1YGR110W 1338 nt3.43□□□□□ -1.86
CLP1Q08685 CNA1YLR433C 1662 nt3.43□□□□□ -1.86
CLP1Q08685 MAF1YDR005C 1188 nt3.42□□□□□ -1.86
CLP1Q08685 RMT2YDR465C 1239 nt3.42□□□□□ -1.86
CLP1Q08685 YGL262WYGL262W 528 nt3.42□□□□□ -1.86
CLP1Q08685 ERV29YGR284C 933 nt3.42□□□□□ -1.86
CLP1Q08685 REE1YJL217W 597 nt3.42□□□□□ -1.86
CLP1Q08685 DIB1YPR082C 432 nt3.42□□□□□ -1.86
CLP1Q08685 MRPL11YDL202W 750 nt3.41□□□□□ -1.86
CLP1Q08685 tC(GCA)BtC(GCA)B 72 nt3.41□□□□□ -1.86
CLP1Q08685 tC(GCA)GtC(GCA)G 72 nt3.41□□□□□ -1.86
CLP1Q08685 tC(GCA)P1tC(GCA)P1 72 nt3.41□□□□□ -1.86
CLP1Q08685 tC(GCA)P2tC(GCA)P2 72 nt3.41□□□□□ -1.86
CLP1Q08685 AGE2YIL044C 897 nt3.41□□□□□ -1.86
CLP1Q08685 PCD1YLR151C 1023 nt3.41□□□□□ -1.86
CLP1Q08685 VTA1YLR181C 993 nt3.41□□□□□ -1.86
CLP1Q08685 ERG2YMR202W 669 nt3.41□□□□□ -1.86
CLP1Q08685 YBL065WYBL065W 345 nt3.41□□□□□ -1.86
CLP1Q08685 YBL081WYBL081W 1107 nt3.41□□□□□ -1.86
CLP1Q08685 TIR2YOR010C 756 nt3.41□□□□□ -1.86
CLP1Q08685 YGR117CYGR117C 1431 nt3.41□□□□□ -1.86
CLP1Q08685 PRR2YDL214C 2100 nt3.41□□□□□ -1.86
CLP1Q08685 ASI1YMR119W 1875 nt3.41□□□□□ -1.86
CLP1Q08685 TIF4631YGR162W 2859 nt3.41□□□□□ -1.86
CLP1Q08685 STE23YLR389C 3084 nt3.4□□□□□ -1.86
CLP1Q08685 TAF2YCR042C 4224 nt3.4□□□□□ -1.86
CLP1Q08685 RPN1YHR027C 2982 nt3.4□□□□□ -1.86
CLP1Q08685 MDN1YLR106C 14733 nt3.4□□□□□ -1.87
CLP1Q08685 OPI6YDL096C 327 nt3.4□□□□□ -1.87
CLP1Q08685 HAT2YEL056W 1206 nt3.4□□□□□ -1.87
CLP1Q08685 TIM21YGR033C 720 nt3.4□□□□□ -1.87
CLP1Q08685 TAF1YGR274C 3201 nt3.4□□□□□ -1.87
CLP1Q08685 RRG9YNL213C 645 nt3.4□□□□□ -1.87
CLP1Q08685 MCK1YNL307C 1128 nt3.4□□□□□ -1.87
CLP1Q08685 PHO5YBR093C 1404 nt3.4□□□□□ -1.87
CLP1Q08685 POL3YDL102W 3294 nt3.4□□□□□ -1.87
CLP1Q08685 YDL180WYDL180W 1644 nt3.4□□□□□ -1.87
CLP1Q08685 HER2YMR293C 1395 nt3.39□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 32.4 ms