Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.8■□□□□ 0.6
Sox4Q06831 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox4Q06831 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox4Q06831 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sox4Q06831 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox4Q06831 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.8■□□□□ 0.6
Sox4Q06831 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.8■□□□□ 0.6
Sox4Q06831 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.8■□□□□ 0.6
Sox4Q06831 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox4Q06831 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox4Q06831 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox4Q06831 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox4Q06831 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox4Q06831 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sox4Q06831 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox4Q06831 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox4Q06831 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox4Q06831 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sox4Q06831 AV356131-201ENSMUST00000206201 750 ntBASIC18.79■□□□□ 0.6
Sox4Q06831 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox4Q06831 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox4Q06831 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox4Q06831 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.79■□□□□ 0.6
Sox4Q06831 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox4Q06831 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox4Q06831 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox4Q06831 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox4Q06831 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox4Q06831 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.78■□□□□ 0.6
Sox4Q06831 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.78■□□□□ 0.6
Sox4Q06831 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sox4Q06831 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox4Q06831 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sox4Q06831 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.77■□□□□ 0.6
Sox4Q06831 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox4Q06831 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Sox4Q06831 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox4Q06831 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Sox4Q06831 Gm10849-201ENSMUST00000100397 618 ntBASIC18.77■□□□□ 0.6
Sox4Q06831 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.77■□□□□ 0.6
Sox4Q06831 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.77■□□□□ 0.6
Sox4Q06831 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sox4Q06831 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.77■□□□□ 0.6
Sox4Q06831 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Sox4Q06831 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Sox4Q06831 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sox4Q06831 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sox4Q06831 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox4Q06831 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.76■□□□□ 0.59
Sox4Q06831 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox4Q06831 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox4Q06831 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox4Q06831 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.76■□□□□ 0.59
Sox4Q06831 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox4Q06831 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox4Q06831 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox4Q06831 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox4Q06831 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox4Q06831 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sox4Q06831 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sox4Q06831 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sox4Q06831 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sox4Q06831 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sox4Q06831 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sox4Q06831 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox4Q06831 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sox4Q06831 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox4Q06831 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sox4Q06831 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sox4Q06831 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox4Q06831 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Sox4Q06831 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox4Q06831 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.74■□□□□ 0.59
Sox4Q06831 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sox4Q06831 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sox4Q06831 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox4Q06831 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.74■□□□□ 0.59
Sox4Q06831 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sox4Q06831 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox4Q06831 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox4Q06831 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox4Q06831 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sox4Q06831 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sox4Q06831 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sox4Q06831 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox4Q06831 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox4Q06831 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox4Q06831 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Sox4Q06831 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox4Q06831 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox4Q06831 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox4Q06831 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox4Q06831 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox4Q06831 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Sox4Q06831 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.73■□□□□ 0.59
Sox4Q06831 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.73■□□□□ 0.59
Sox4Q06831 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox4Q06831 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox4Q06831 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sox4Q06831 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms