Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.32□□□□□ -0.12
Hspg2Q05793 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.32□□□□□ -0.12
Hspg2Q05793 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.32□□□□□ -0.12
Hspg2Q05793 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hspg2Q05793 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hspg2Q05793 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hspg2Q05793 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hspg2Q05793 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hspg2Q05793 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hspg2Q05793 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hspg2Q05793 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hspg2Q05793 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hspg2Q05793 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hspg2Q05793 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hspg2Q05793 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hspg2Q05793 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hspg2Q05793 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hspg2Q05793 Gm11249-201ENSMUST00000117071 859 ntBASIC14.31□□□□□ -0.12
Hspg2Q05793 Gm6433-201ENSMUST00000118634 875 ntBASIC14.31□□□□□ -0.12
Hspg2Q05793 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
Hspg2Q05793 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hspg2Q05793 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hspg2Q05793 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hspg2Q05793 Gm6576-201ENSMUST00000169678 883 ntBASIC14.31□□□□□ -0.12
Hspg2Q05793 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hspg2Q05793 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hspg2Q05793 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hspg2Q05793 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hspg2Q05793 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hspg2Q05793 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.3□□□□□ -0.12
Hspg2Q05793 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hspg2Q05793 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hspg2Q05793 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hspg2Q05793 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hspg2Q05793 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hspg2Q05793 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hspg2Q05793 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hspg2Q05793 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hspg2Q05793 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.3□□□□□ -0.12
Hspg2Q05793 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hspg2Q05793 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.3□□□□□ -0.12
Hspg2Q05793 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.3□□□□□ -0.12
Hspg2Q05793 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hspg2Q05793 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hspg2Q05793 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hspg2Q05793 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hspg2Q05793 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hspg2Q05793 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hspg2Q05793 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.29□□□□□ -0.12
Hspg2Q05793 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Hspg2Q05793 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.29□□□□□ -0.12
Hspg2Q05793 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hspg2Q05793 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hspg2Q05793 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.29□□□□□ -0.12
Hspg2Q05793 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hspg2Q05793 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hspg2Q05793 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hspg2Q05793 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hspg2Q05793 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hspg2Q05793 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hspg2Q05793 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hspg2Q05793 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hspg2Q05793 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.28□□□□□ -0.12
Hspg2Q05793 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hspg2Q05793 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hspg2Q05793 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.28□□□□□ -0.12
Hspg2Q05793 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hspg2Q05793 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.28□□□□□ -0.12
Hspg2Q05793 Mir1199-201ENSMUST00000117015 119 ntBASIC14.28□□□□□ -0.12
Hspg2Q05793 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hspg2Q05793 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hspg2Q05793 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hspg2Q05793 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hspg2Q05793 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hspg2Q05793 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hspg2Q05793 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hspg2Q05793 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hspg2Q05793 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hspg2Q05793 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hspg2Q05793 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hspg2Q05793 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.27□□□□□ -0.13
Hspg2Q05793 Gm21362-201ENSMUST00000194272 928 ntBASIC14.27□□□□□ -0.13
Hspg2Q05793 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hspg2Q05793 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hspg2Q05793 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hspg2Q05793 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Hspg2Q05793 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.26□□□□□ -0.13
Hspg2Q05793 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hspg2Q05793 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Hspg2Q05793 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hspg2Q05793 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.26□□□□□ -0.13
Hspg2Q05793 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hspg2Q05793 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Hspg2Q05793 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.26□□□□□ -0.13
Hspg2Q05793 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hspg2Q05793 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.26□□□□□ -0.13
Hspg2Q05793 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hspg2Q05793 Rab3c-203ENSMUST00000224180 967 ntBASIC14.26□□□□□ -0.13
Hspg2Q05793 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Hspg2Q05793 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms