Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Brca2P97929 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Brca2P97929 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Brca2P97929 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Brca2P97929 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Brca2P97929 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Brca2P97929 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Brca2P97929 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.72■□□□□ 0.59
Brca2P97929 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.72■□□□□ 0.59
Brca2P97929 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Brca2P97929 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Brca2P97929 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Brca2P97929 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Brca2P97929 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Brca2P97929 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Brca2P97929 Gm7367-201ENSMUST00000057611 492 ntBASIC18.72■□□□□ 0.59
Brca2P97929 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Brca2P97929 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Brca2P97929 Mir5122-201ENSMUST00000175004 89 ntBASIC18.71■□□□□ 0.59
Brca2P97929 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Brca2P97929 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Brca2P97929 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Brca2P97929 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Brca2P97929 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Brca2P97929 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Brca2P97929 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Brca2P97929 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Brca2P97929 Mir1199-201ENSMUST00000117015 119 ntBASIC18.71■□□□□ 0.58
Brca2P97929 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
Brca2P97929 Gm10698-201ENSMUST00000182663 604 ntBASIC18.71■□□□□ 0.58
Brca2P97929 Rab3c-203ENSMUST00000224180 967 ntBASIC18.71■□□□□ 0.58
Brca2P97929 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Brca2P97929 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.7■□□□□ 0.58
Brca2P97929 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.7■□□□□ 0.58
Brca2P97929 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Brca2P97929 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Brca2P97929 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Brca2P97929 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.7■□□□□ 0.58
Brca2P97929 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Brca2P97929 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Brca2P97929 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Brca2P97929 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.69■□□□□ 0.58
Brca2P97929 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Brca2P97929 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Brca2P97929 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.69■□□□□ 0.58
Brca2P97929 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Brca2P97929 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.68■□□□□ 0.58
Brca2P97929 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Brca2P97929 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Brca2P97929 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Brca2P97929 Dio3-201ENSMUST00000097228 1449 ntBASIC18.68■□□□□ 0.58
Brca2P97929 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Brca2P97929 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca2P97929 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Brca2P97929 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Brca2P97929 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca2P97929 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Brca2P97929 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.67■□□□□ 0.58
Brca2P97929 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Brca2P97929 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca2P97929 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Brca2P97929 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca2P97929 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Brca2P97929 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brca2P97929 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.66■□□□□ 0.58
Brca2P97929 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.66■□□□□ 0.58
Brca2P97929 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brca2P97929 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brca2P97929 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brca2P97929 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brca2P97929 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brca2P97929 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brca2P97929 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Brca2P97929 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.66■□□□□ 0.58
Brca2P97929 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brca2P97929 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brca2P97929 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.66■□□□□ 0.58
Brca2P97929 Gm2559-201ENSMUST00000201323 363 ntBASIC18.66■□□□□ 0.58
Brca2P97929 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brca2P97929 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Brca2P97929 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brca2P97929 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Brca2P97929 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.65■□□□□ 0.58
Brca2P97929 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brca2P97929 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brca2P97929 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brca2P97929 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brca2P97929 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.64■□□□□ 0.58
Brca2P97929 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Brca2P97929 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brca2P97929 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.64■□□□□ 0.57
Brca2P97929 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Brca2P97929 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Brca2P97929 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.64■□□□□ 0.57
Brca2P97929 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brca2P97929 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brca2P97929 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brca2P97929 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brca2P97929 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brca2P97929 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms