Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
IhhP97812 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
IhhP97812 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IhhP97812 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
IhhP97812 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.96■□□□□ 0.79
IhhP97812 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.96■□□□□ 0.79
IhhP97812 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
IhhP97812 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.96■□□□□ 0.79
IhhP97812 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
IhhP97812 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IhhP97812 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IhhP97812 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.96■□□□□ 0.79
IhhP97812 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IhhP97812 Notumos-201ENSMUST00000151998 2659 ntBASIC19.96■□□□□ 0.79
IhhP97812 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IhhP97812 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
IhhP97812 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IhhP97812 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IhhP97812 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
IhhP97812 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IhhP97812 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
IhhP97812 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
IhhP97812 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
IhhP97812 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
IhhP97812 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
IhhP97812 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IhhP97812 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IhhP97812 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
IhhP97812 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.94■□□□□ 0.78
IhhP97812 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
IhhP97812 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
IhhP97812 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IhhP97812 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
IhhP97812 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
IhhP97812 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
IhhP97812 Gm6420-201ENSMUST00000193885 723 ntBASIC19.93■□□□□ 0.78
IhhP97812 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IhhP97812 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
IhhP97812 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
IhhP97812 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
IhhP97812 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
IhhP97812 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
IhhP97812 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
IhhP97812 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
IhhP97812 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.92■□□□□ 0.78
IhhP97812 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.92■□□□□ 0.78
IhhP97812 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
IhhP97812 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.91■□□□□ 0.78
IhhP97812 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IhhP97812 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.91■□□□□ 0.78
IhhP97812 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
IhhP97812 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.91■□□□□ 0.78
IhhP97812 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IhhP97812 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
IhhP97812 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
IhhP97812 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
IhhP97812 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IhhP97812 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IhhP97812 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IhhP97812 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IhhP97812 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IhhP97812 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IhhP97812 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IhhP97812 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.9■□□□□ 0.78
IhhP97812 Gm29257-201ENSMUST00000186115 639 ntBASIC19.9■□□□□ 0.78
IhhP97812 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.9■□□□□ 0.78
IhhP97812 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IhhP97812 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
IhhP97812 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IhhP97812 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.9■□□□□ 0.78
IhhP97812 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IhhP97812 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.9■□□□□ 0.78
IhhP97812 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
IhhP97812 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IhhP97812 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
IhhP97812 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
IhhP97812 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
IhhP97812 Nespas-201ENSMUST00000143738 1083 ntBASIC19.89■□□□□ 0.77
IhhP97812 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IhhP97812 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IhhP97812 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.89■□□□□ 0.77
IhhP97812 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
IhhP97812 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
IhhP97812 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
IhhP97812 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
IhhP97812 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
IhhP97812 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
IhhP97812 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
IhhP97812 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
IhhP97812 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
IhhP97812 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
IhhP97812 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
IhhP97812 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
IhhP97812 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IhhP97812 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IhhP97812 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IhhP97812 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
IhhP97812 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.87■□□□□ 0.77
IhhP97812 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.87■□□□□ 0.77
IhhP97812 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms