Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43bP86448 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43bP86448 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43bP86448 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim43bP86448 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43bP86448 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43bP86448 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43bP86448 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43bP86448 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43bP86448 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43bP86448 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43bP86448 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43bP86448 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Trim43bP86448 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
Trim43bP86448 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
Trim43bP86448 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43bP86448 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43bP86448 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Trim43bP86448 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim43bP86448 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.56■□□□□ 0.72
Trim43bP86448 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim43bP86448 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43bP86448 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim43bP86448 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43bP86448 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43bP86448 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43bP86448 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43bP86448 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Trim43bP86448 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.56■□□□□ 0.72
Trim43bP86448 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim43bP86448 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim43bP86448 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trim43bP86448 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43bP86448 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43bP86448 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim43bP86448 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43bP86448 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.55■□□□□ 0.72
Trim43bP86448 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43bP86448 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43bP86448 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43bP86448 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43bP86448 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43bP86448 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43bP86448 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Trim43bP86448 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.55■□□□□ 0.72
Trim43bP86448 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim43bP86448 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim43bP86448 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim43bP86448 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.54■□□□□ 0.72
Trim43bP86448 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43bP86448 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43bP86448 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43bP86448 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43bP86448 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim43bP86448 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43bP86448 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Trim43bP86448 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43bP86448 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43bP86448 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim43bP86448 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43bP86448 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43bP86448 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43bP86448 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43bP86448 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Trim43bP86448 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim43bP86448 BC021767-201ENSMUST00000126387 1716 ntBASIC19.54■□□□□ 0.72
Trim43bP86448 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43bP86448 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43bP86448 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43bP86448 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.53■□□□□ 0.72
Trim43bP86448 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Trim43bP86448 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim43bP86448 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43bP86448 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43bP86448 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43bP86448 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43bP86448 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43bP86448 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Trim43bP86448 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43bP86448 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43bP86448 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43bP86448 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43bP86448 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.52■□□□□ 0.72
Trim43bP86448 Gm8493-201ENSMUST00000196881 489 ntBASIC19.52■□□□□ 0.72
Trim43bP86448 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Trim43bP86448 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43bP86448 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43bP86448 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Trim43bP86448 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim43bP86448 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim43bP86448 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43bP86448 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43bP86448 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43bP86448 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43bP86448 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43bP86448 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43bP86448 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
Trim43bP86448 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43bP86448 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43bP86448 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms