Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SgcbP82349 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SgcbP82349 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SgcbP82349 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SgcbP82349 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SgcbP82349 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SgcbP82349 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
SgcbP82349 Gm42642-201ENSMUST00000200683 355 ntBASIC17.07■□□□□ 0.32
SgcbP82349 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SgcbP82349 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SgcbP82349 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SgcbP82349 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SgcbP82349 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SgcbP82349 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SgcbP82349 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SgcbP82349 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SgcbP82349 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.06■□□□□ 0.32
SgcbP82349 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SgcbP82349 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SgcbP82349 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.06■□□□□ 0.32
SgcbP82349 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SgcbP82349 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SgcbP82349 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SgcbP82349 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SgcbP82349 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SgcbP82349 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SgcbP82349 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
SgcbP82349 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SgcbP82349 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SgcbP82349 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.05■□□□□ 0.32
SgcbP82349 Gm18671-201ENSMUST00000214826 683 ntBASIC17.05■□□□□ 0.32
SgcbP82349 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SgcbP82349 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SgcbP82349 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SgcbP82349 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.05■□□□□ 0.32
SgcbP82349 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SgcbP82349 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.05■□□□□ 0.32
SgcbP82349 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SgcbP82349 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SgcbP82349 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SgcbP82349 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SgcbP82349 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SgcbP82349 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SgcbP82349 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SgcbP82349 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SgcbP82349 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SgcbP82349 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SgcbP82349 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SgcbP82349 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SgcbP82349 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SgcbP82349 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.04■□□□□ 0.32
SgcbP82349 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SgcbP82349 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SgcbP82349 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.04■□□□□ 0.32
SgcbP82349 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SgcbP82349 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SgcbP82349 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SgcbP82349 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SgcbP82349 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SgcbP82349 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.03■□□□□ 0.32
SgcbP82349 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SgcbP82349 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SgcbP82349 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SgcbP82349 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SgcbP82349 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SgcbP82349 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SgcbP82349 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
SgcbP82349 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SgcbP82349 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SgcbP82349 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SgcbP82349 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SgcbP82349 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.02■□□□□ 0.32
SgcbP82349 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.02■□□□□ 0.32
SgcbP82349 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SgcbP82349 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SgcbP82349 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
SgcbP82349 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SgcbP82349 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcbP82349 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SgcbP82349 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcbP82349 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcbP82349 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SgcbP82349 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SgcbP82349 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SgcbP82349 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SgcbP82349 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SgcbP82349 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.01■□□□□ 0.31
SgcbP82349 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SgcbP82349 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcbP82349 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcbP82349 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcbP82349 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcbP82349 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcbP82349 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcbP82349 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcbP82349 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SgcbP82349 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
SgcbP82349 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcbP82349 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17■□□□□ 0.31
SgcbP82349 Reep4-203ENSMUST00000226563 1444 ntBASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms