Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.96■□□□□ 0.95
Hmgb1P63158 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb1P63158 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.96■□□□□ 0.95
Hmgb1P63158 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb1P63158 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb1P63158 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb1P63158 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb1P63158 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Hmgb1P63158 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb1P63158 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.96■□□□□ 0.95
Hmgb1P63158 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb1P63158 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb1P63158 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb1P63158 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Hmgb1P63158 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb1P63158 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb1P63158 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Hmgb1P63158 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgb1P63158 Golph3-205ENSMUST00000228671 2842 ntBASIC20.96■□□□□ 0.95
Hmgb1P63158 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgb1P63158 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgb1P63158 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgb1P63158 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgb1P63158 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.95■□□□□ 0.94
Hmgb1P63158 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.95■□□□□ 0.94
Hmgb1P63158 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Hmgb1P63158 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Hmgb1P63158 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgb1P63158 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Hmgb1P63158 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Hmgb1P63158 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.95■□□□□ 0.94
Hmgb1P63158 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgb1P63158 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
Hmgb1P63158 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgb1P63158 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb1P63158 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb1P63158 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb1P63158 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb1P63158 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.94■□□□□ 0.94
Hmgb1P63158 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb1P63158 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb1P63158 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb1P63158 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb1P63158 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.94■□□□□ 0.94
Hmgb1P63158 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb1P63158 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb1P63158 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgb1P63158 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb1P63158 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb1P63158 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb1P63158 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.93■□□□□ 0.94
Hmgb1P63158 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb1P63158 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb1P63158 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb1P63158 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb1P63158 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb1P63158 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb1P63158 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb1P63158 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgb1P63158 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb1P63158 BC021767-201ENSMUST00000126387 1716 ntBASIC20.92■□□□□ 0.94
Hmgb1P63158 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb1P63158 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Hmgb1P63158 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb1P63158 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb1P63158 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb1P63158 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb1P63158 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.92■□□□□ 0.94
Hmgb1P63158 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb1P63158 Gm12251-201ENSMUST00000117893 792 ntBASIC20.92■□□□□ 0.94
Hmgb1P63158 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.92■□□□□ 0.94
Hmgb1P63158 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb1P63158 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.92■□□□□ 0.94
Hmgb1P63158 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Hmgb1P63158 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.92■□□□□ 0.94
Hmgb1P63158 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.92■□□□□ 0.94
Hmgb1P63158 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgb1P63158 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.92■□□□□ 0.94
Hmgb1P63158 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Hmgb1P63158 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgb1P63158 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgb1P63158 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Hmgb1P63158 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.91■□□□□ 0.94
Hmgb1P63158 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgb1P63158 Gm21956-201ENSMUST00000179946 522 ntBASIC20.91■□□□□ 0.94
Hmgb1P63158 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.91■□□□□ 0.94
Hmgb1P63158 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgb1P63158 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgb1P63158 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgb1P63158 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Hmgb1P63158 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Hmgb1P63158 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.91■□□□□ 0.94
Hmgb1P63158 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgb1P63158 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Hmgb1P63158 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgb1P63158 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgb1P63158 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.9■□□□□ 0.94
Hmgb1P63158 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgb1P63158 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgb1P63158 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms