Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks2P56390 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cks2P56390 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Cks2P56390 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks2P56390 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks2P56390 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks2P56390 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks2P56390 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cks2P56390 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks2P56390 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks2P56390 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks2P56390 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks2P56390 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks2P56390 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks2P56390 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cks2P56390 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.96■□□□□ 0.14
Cks2P56390 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cks2P56390 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cks2P56390 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.95■□□□□ 0.14
Cks2P56390 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cks2P56390 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks2P56390 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks2P56390 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Cks2P56390 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks2P56390 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.95■□□□□ 0.14
Cks2P56390 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks2P56390 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks2P56390 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks2P56390 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Cks2P56390 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cks2P56390 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Cks2P56390 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cks2P56390 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cks2P56390 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cks2P56390 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cks2P56390 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.94■□□□□ 0.14
Cks2P56390 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cks2P56390 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.94■□□□□ 0.14
Cks2P56390 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cks2P56390 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cks2P56390 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.94■□□□□ 0.14
Cks2P56390 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cks2P56390 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cks2P56390 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cks2P56390 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cks2P56390 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cks2P56390 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks2P56390 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cks2P56390 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks2P56390 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cks2P56390 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cks2P56390 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks2P56390 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cks2P56390 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cks2P56390 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks2P56390 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks2P56390 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.93■□□□□ 0.14
Cks2P56390 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks2P56390 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks2P56390 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks2P56390 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks2P56390 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks2P56390 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.93■□□□□ 0.14
Cks2P56390 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks2P56390 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cks2P56390 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Cks2P56390 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cks2P56390 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cks2P56390 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cks2P56390 Gm22238-201ENSMUST00000175222 88 ntBASIC15.92■□□□□ 0.14
Cks2P56390 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cks2P56390 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cks2P56390 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cks2P56390 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cks2P56390 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cks2P56390 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cks2P56390 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cks2P56390 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cks2P56390 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Cks2P56390 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cks2P56390 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cks2P56390 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks2P56390 BC021767-201ENSMUST00000126387 1716 ntBASIC15.91■□□□□ 0.14
Cks2P56390 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks2P56390 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks2P56390 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.91■□□□□ 0.14
Cks2P56390 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks2P56390 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.91■□□□□ 0.14
Cks2P56390 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cks2P56390 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks2P56390 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cks2P56390 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cks2P56390 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cks2P56390 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks2P56390 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks2P56390 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cks2P56390 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.9■□□□□ 0.14
Cks2P56390 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Cks2P56390 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cks2P56390 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms