Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh5P55284 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.54■□□□□ 0.56
Cdh5P55284 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh5P55284 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh5P55284 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Cdh5P55284 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdh5P55284 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Cdh5P55284 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh5P55284 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh5P55284 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh5P55284 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.53■□□□□ 0.56
Cdh5P55284 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh5P55284 Gm8493-201ENSMUST00000196881 489 ntBASIC18.53■□□□□ 0.56
Cdh5P55284 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh5P55284 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cdh5P55284 Grk6-206ENSMUST00000224995 2971 ntBASIC18.53■□□□□ 0.56
Cdh5P55284 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdh5P55284 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
Cdh5P55284 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdh5P55284 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cdh5P55284 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh5P55284 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdh5P55284 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh5P55284 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
Cdh5P55284 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Cdh5P55284 Gm43017-201ENSMUST00000198296 752 ntBASIC18.52■□□□□ 0.56
Cdh5P55284 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh5P55284 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdh5P55284 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdh5P55284 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdh5P55284 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cdh5P55284 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh5P55284 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh5P55284 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh5P55284 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cdh5P55284 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cdh5P55284 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Cdh5P55284 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cdh5P55284 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh5P55284 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cdh5P55284 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Cdh5P55284 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh5P55284 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.51■□□□□ 0.55
Cdh5P55284 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh5P55284 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cdh5P55284 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh5P55284 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh5P55284 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh5P55284 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdh5P55284 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh5P55284 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh5P55284 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh5P55284 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh5P55284 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh5P55284 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.5■□□□□ 0.55
Cdh5P55284 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh5P55284 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh5P55284 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh5P55284 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.5■□□□□ 0.55
Cdh5P55284 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.5■□□□□ 0.55
Cdh5P55284 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
Cdh5P55284 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cdh5P55284 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
Cdh5P55284 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.5■□□□□ 0.55
Cdh5P55284 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh5P55284 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh5P55284 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh5P55284 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh5P55284 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdh5P55284 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh5P55284 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh5P55284 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh5P55284 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Cdh5P55284 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh5P55284 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.49■□□□□ 0.55
Cdh5P55284 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh5P55284 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh5P55284 Gm12251-201ENSMUST00000117893 792 ntBASIC18.49■□□□□ 0.55
Cdh5P55284 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.49■□□□□ 0.55
Cdh5P55284 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh5P55284 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Cdh5P55284 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cdh5P55284 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh5P55284 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh5P55284 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh5P55284 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh5P55284 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdh5P55284 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.49■□□□□ 0.55
Cdh5P55284 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh5P55284 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh5P55284 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh5P55284 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.48■□□□□ 0.55
Cdh5P55284 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh5P55284 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh5P55284 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh5P55284 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh5P55284 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh5P55284 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cdh5P55284 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cdh5P55284 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms