Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcs2P54869 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcs2P54869 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hmgcs2P54869 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hmgcs2P54869 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Hmgcs2P54869 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Hmgcs2P54869 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Hmgcs2P54869 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.42■■□□□ 1.02
Hmgcs2P54869 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hmgcs2P54869 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hmgcs2P54869 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hmgcs2P54869 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hmgcs2P54869 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hmgcs2P54869 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.42■■□□□ 1.02
Hmgcs2P54869 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hmgcs2P54869 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hmgcs2P54869 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hmgcs2P54869 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hmgcs2P54869 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Hmgcs2P54869 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hmgcs2P54869 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hmgcs2P54869 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hmgcs2P54869 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hmgcs2P54869 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hmgcs2P54869 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Hmgcs2P54869 Gm27275-201ENSMUST00000184318 272 ntBASIC21.4■■□□□ 1.02
Hmgcs2P54869 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Hmgcs2P54869 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Hmgcs2P54869 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hmgcs2P54869 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hmgcs2P54869 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hmgcs2P54869 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.4■■□□□ 1.02
Hmgcs2P54869 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hmgcs2P54869 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Hmgcs2P54869 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hmgcs2P54869 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hmgcs2P54869 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hmgcs2P54869 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.38■■□□□ 1.01
Hmgcs2P54869 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hmgcs2P54869 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Hmgcs2P54869 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Hmgcs2P54869 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hmgcs2P54869 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hmgcs2P54869 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.38■■□□□ 1.01
Hmgcs2P54869 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Hmgcs2P54869 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hmgcs2P54869 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hmgcs2P54869 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hmgcs2P54869 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hmgcs2P54869 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.37■■□□□ 1.01
Hmgcs2P54869 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Hmgcs2P54869 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hmgcs2P54869 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hmgcs2P54869 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hmgcs2P54869 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hmgcs2P54869 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Hmgcs2P54869 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hmgcs2P54869 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hmgcs2P54869 Gm12896-201ENSMUST00000118430 226 ntBASIC21.36■■□□□ 1.01
Hmgcs2P54869 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.36■■□□□ 1.01
Hmgcs2P54869 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Hmgcs2P54869 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hmgcs2P54869 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hmgcs2P54869 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.36■■□□□ 1.01
Hmgcs2P54869 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hmgcs2P54869 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.35■■□□□ 1.01
Hmgcs2P54869 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hmgcs2P54869 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hmgcs2P54869 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hmgcs2P54869 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.35■■□□□ 1.01
Hmgcs2P54869 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hmgcs2P54869 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.35■■□□□ 1.01
Hmgcs2P54869 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hmgcs2P54869 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hmgcs2P54869 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Hmgcs2P54869 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hmgcs2P54869 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hmgcs2P54869 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hmgcs2P54869 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hmgcs2P54869 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hmgcs2P54869 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.34■■□□□ 1.01
Hmgcs2P54869 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Hmgcs2P54869 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.34■■□□□ 1.01
Hmgcs2P54869 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Hmgcs2P54869 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Hmgcs2P54869 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.34■■□□□ 1.01
Hmgcs2P54869 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Hmgcs2P54869 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Hmgcs2P54869 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.33■■□□□ 1.01
Hmgcs2P54869 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.33■■□□□ 1.01
Hmgcs2P54869 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Hmgcs2P54869 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hmgcs2P54869 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.33■■□□□ 1
Hmgcs2P54869 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Hmgcs2P54869 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
Hmgcs2P54869 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hmgcs2P54869 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hmgcs2P54869 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Hmgcs2P54869 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Hmgcs2P54869 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms