Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC24.5■■□□□ 1.51
Msh6P54276 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC24.5■■□□□ 1.51
Msh6P54276 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Msh6P54276 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Msh6P54276 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Msh6P54276 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC24.49■■□□□ 1.51
Msh6P54276 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
Msh6P54276 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Msh6P54276 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Msh6P54276 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Msh6P54276 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Msh6P54276 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Msh6P54276 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Msh6P54276 Gm34220-201ENSMUST00000223001 2709 ntBASIC24.49■■□□□ 1.51
Msh6P54276 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Msh6P54276 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Msh6P54276 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Msh6P54276 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Msh6P54276 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC24.48■■□□□ 1.51
Msh6P54276 Gm7860-201ENSMUST00000121190 879 ntBASIC24.48■■□□□ 1.51
Msh6P54276 Gm44878-201ENSMUST00000205812 1295 ntBASIC24.48■■□□□ 1.51
Msh6P54276 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC24.48■■□□□ 1.51
Msh6P54276 Gm10812-201ENSMUST00000099864 546 ntBASIC24.48■■□□□ 1.51
Msh6P54276 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Msh6P54276 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
Msh6P54276 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Msh6P54276 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Msh6P54276 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Msh6P54276 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Msh6P54276 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
Msh6P54276 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Msh6P54276 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
Msh6P54276 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Msh6P54276 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC24.47■■□□□ 1.51
Msh6P54276 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Msh6P54276 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Msh6P54276 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Msh6P54276 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC24.47■■□□□ 1.51
Msh6P54276 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC24.47■■□□□ 1.51
Msh6P54276 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Msh6P54276 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Msh6P54276 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC24.46■■□□□ 1.51
Msh6P54276 Mir7071-201ENSMUST00000184847 69 ntBASIC24.46■■□□□ 1.51
Msh6P54276 Trmt13-210ENSMUST00000198454 880 ntBASIC24.46■■□□□ 1.51
Msh6P54276 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Msh6P54276 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Msh6P54276 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Msh6P54276 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Msh6P54276 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Msh6P54276 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Msh6P54276 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC24.45■■□□□ 1.5
Msh6P54276 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC24.45■■□□□ 1.5
Msh6P54276 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Msh6P54276 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Msh6P54276 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Msh6P54276 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Msh6P54276 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Msh6P54276 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Msh6P54276 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Msh6P54276 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Msh6P54276 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Msh6P54276 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Msh6P54276 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Msh6P54276 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Msh6P54276 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Msh6P54276 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Msh6P54276 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC24.43■■□□□ 1.5
Msh6P54276 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC24.43■■□□□ 1.5
Msh6P54276 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Msh6P54276 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Msh6P54276 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Msh6P54276 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC24.43■■□□□ 1.5
Msh6P54276 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Msh6P54276 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Msh6P54276 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Msh6P54276 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC24.42■■□□□ 1.5
Msh6P54276 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Msh6P54276 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Msh6P54276 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Msh6P54276 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Msh6P54276 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Msh6P54276 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Msh6P54276 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Msh6P54276 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Msh6P54276 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Msh6P54276 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Msh6P54276 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Msh6P54276 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Msh6P54276 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Msh6P54276 Gm22325-201ENSMUST00000158904 308 ntBASIC24.4■■□□□ 1.5
Msh6P54276 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Msh6P54276 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Msh6P54276 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Msh6P54276 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Msh6P54276 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Msh6P54276 Gm13181-201ENSMUST00000120117 1069 ntBASIC24.39■■□□□ 1.49
Msh6P54276 Rab3c-203ENSMUST00000224180 967 ntBASIC24.39■■□□□ 1.49
Msh6P54276 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC24.38■■□□□ 1.49
Msh6P54276 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Msh6P54276 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms