Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.96■□□□□ 0.63
Atxn1P54254 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Atxn1P54254 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.96■□□□□ 0.63
Atxn1P54254 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.96■□□□□ 0.63
Atxn1P54254 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Atxn1P54254 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Atxn1P54254 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Atxn1P54254 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Atxn1P54254 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Atxn1P54254 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Atxn1P54254 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Atxn1P54254 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atxn1P54254 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atxn1P54254 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atxn1P54254 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atxn1P54254 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Atxn1P54254 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.95■□□□□ 0.62
Atxn1P54254 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.95■□□□□ 0.62
Atxn1P54254 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.95■□□□□ 0.62
Atxn1P54254 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.95■□□□□ 0.62
Atxn1P54254 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atxn1P54254 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atxn1P54254 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atxn1P54254 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atxn1P54254 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Atxn1P54254 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Atxn1P54254 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Atxn1P54254 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Atxn1P54254 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atxn1P54254 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atxn1P54254 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Atxn1P54254 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.94■□□□□ 0.62
Atxn1P54254 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.94■□□□□ 0.62
Atxn1P54254 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.94■□□□□ 0.62
Atxn1P54254 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Atxn1P54254 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atxn1P54254 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Atxn1P54254 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atxn1P54254 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Atxn1P54254 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atxn1P54254 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.94■□□□□ 0.62
Atxn1P54254 Gm6420-201ENSMUST00000193885 723 ntBASIC18.94■□□□□ 0.62
Atxn1P54254 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atxn1P54254 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Atxn1P54254 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atxn1P54254 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Atxn1P54254 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atxn1P54254 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atxn1P54254 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atxn1P54254 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atxn1P54254 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atxn1P54254 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atxn1P54254 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atxn1P54254 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.93■□□□□ 0.62
Atxn1P54254 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Atxn1P54254 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Atxn1P54254 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atxn1P54254 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atxn1P54254 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atxn1P54254 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Atxn1P54254 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atxn1P54254 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atxn1P54254 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atxn1P54254 Gm13146-201ENSMUST00000118508 780 ntBASIC18.92■□□□□ 0.62
Atxn1P54254 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Atxn1P54254 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atxn1P54254 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atxn1P54254 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atxn1P54254 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atxn1P54254 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atxn1P54254 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atxn1P54254 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.91■□□□□ 0.62
Atxn1P54254 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atxn1P54254 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atxn1P54254 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Atxn1P54254 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.91■□□□□ 0.62
Atxn1P54254 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.91■□□□□ 0.62
Atxn1P54254 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.91■□□□□ 0.62
Atxn1P54254 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Atxn1P54254 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atxn1P54254 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atxn1P54254 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Atxn1P54254 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atxn1P54254 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms